Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00068 ATGCAAGAACCTGCAGGCTTGGGAATGATGGGTTTAAGCGGAGAGGTCTCAGCTTCCGGAGATCACCACCGACAACTGAAGGCGGAGATAGCCACTCATCCTCTCTATGAACAGCTTCTCGCTGCTCATGTCTCCTGTCTCCGAGTTGCCACTCCGATTGATCAGCTACCACTCATTGATGCCCAGTTATCTCAGTCACACCATCTTCTACGCTCTTATGTTTCTCAACACACTCATTCTCTTTCTCCTCATGACCGCCAAGAACGTGACAACTTCCTGGCACAATATTTGATAGTTTTGTGTACTTTCAAAGAACAGCTTCAGCAACATGTCAGAGTCCATGCCGTCGAGGCTGTCATGGCCTGCCGTGATATCGAAAATACCTTACAAGCTCTCACAGGAGTGAGTTTGGGAGAAGGAAGTGGTGCGACAATGTCAGATGATGAAGATGATATGCAGATGGATTTTTCTTTAGATCAGTCCAGTGCTGATGGCCATGACATGATGGGATTTGGTCCTTTACTTCCTACTGAATCTGAAAGGTCACTGATGGAAAGAGTTCGTCAGGAACTAAAGATTGAGCTTAAACAGGGTTTTAAGTCAAGAATTGAAGATGTTAGGGAGGAAATATTAAGGAAAAGAAGAGCTGGCAAATTACCCGGTGACACTACTACTGTGTTAAAGAACTGGTGGCAGCAACATGCAAAGTGGCCTTACCCAACTGTTAGTGACTAG 735 0.4558 MQEPAGLGMMGLSGEVSASGDHHRQLKAEIATHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYVSQHTHSLSPHDRQERDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGSGATMSDDEDDMQMDFSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHAKWPYPTVSD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00068 244 ProSiteProfiles ELK domain profile. 190 210 IPR005539 GO:0003677
Sebi155g00068 244 Gene3D - 182 244 - -
Sebi155g00068 244 Pfam KNOX1 domain 26 67 IPR005540 GO:0003677|GO:0005634
Sebi155g00068 244 Pfam KNOX2 domain 82 133 IPR005541 GO:0003677|GO:0005634
Sebi155g00068 244 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 41 244 - -
Sebi155g00068 244 SMART KNOX1_2 24 68 IPR005540 GO:0003677|GO:0005634
Sebi155g00068 244 SMART KNOX2_2 79 134 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00068 Sebi-Chr155 655916 659340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00068 1 244 Homeobox Transcription Factor Family AT1G62990 77.291 8.83e-140 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00068 - - gmx:100782179 444.506