Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00048 ATGGATCCAATAACAGCGCATGGGCATTCTCTTCCTCCTCCTTTCCACACAGCAAGAGACCTCCATCTGCACCACCAACATCAGTTCCACTCCTTACAACAGCAAAACACAGAAGACGAACAAAGCGGAAGCAGCGGTGGTCTTAACCTCGCACACAAAAGGGAACGTGAAGAAAATAACAACAACAGTGGTGGTGAAGTGAAGCAAGAGGGAGGTGAAACTGAGATGACAAGAAGACCTCGAGGAAGACCCGCTGGATCCAAGAACAAACCCAAGCCACCTATTATCATCACTCGTGACAGCGCAAATGCCCTAAAAACCCACGTCATGGAGGTCGCTGACGGTTGTGACATCGTAGACAGTGTCTCCAACTTCGCAAGGCGTCGTCAGAGAGGGGTTTGTATCATGAGTGGCACTGGAACCGTCACTAATGTAACGCTCAGGCAACCCGCTTCTTCTGGCGCTGTCGTCACTCTTCATGGAAGGTTCGAGATCCTCTCACTCGCTGGATCGTTCTTGCCACCGCCAGCTCCACCGGCTGCTTCCGGTTTGACCATATATTTAGCAGGTGGACAAGGACAGGTTGTAGGAGGAAGTGTTGTGGGGTCACTCATTGCTTCGGGGCCAGTGGTTATCATATGCCGTCCGAGAATTTCTGGCCAAGTGGTCGCTCTCCTTACTGATGATTAA 690 0.5116 MDPITAHGHSLPPPFHTARDLHLHHQHQFHSLQQQNTEDEQSGSSGGLNLAHKREREENNNNSGGEVKQEGGETEMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVDSVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGSLIASGPVVIICRPRISGQVVALLTDD 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00048 229 ProSiteProfiles PPC domain profile profile. 102 229 IPR005175 -
Sebi155g00048 229 PIRSF ESCAROLA 17 217 IPR014476 GO:0003680
Sebi155g00048 229 SUPERFAMILY AF0104/ALDC/Ptd012-like 102 215 - -
Sebi155g00048 229 CDD DUF296 106 173 IPR005175 -
Sebi155g00048 229 Gene3D - 105 220 - -
Sebi155g00048 229 MobiDBLite consensus disorder prediction 26 95 - -
Sebi155g00048 229 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 213 IPR005175 -
Sebi155g00048 229 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 213 IPR014476 GO:0003680
Sebi155g00048 229 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00048 Sebi-Chr155 498549 499446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00048 1 214 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 59.761 2.03e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00048 - - gmx:100781436 323.939