Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00044 ATGGAAGGTGTTAGCAGTGGCGGGGTTACGGTGGTGGGATCGGATGCTCCGTCGAATTACCATGTAGCTCCGAGGACTGAAACCCCAGCTTCGGCTGCCGGATCCGTCACGGTGCCAGCGGCTAAGGGGAGTATTCAGCCACCGCAACCGGCGGCGACAACGGTGCCGGCGAAGAAGAAGAGAGGTCGCCCAAGAAAGTATGGACCAGATGGCTCGGTGACCTTGGCACTATCTCCTAAGCCCATATCCTCAGCTCCGCCGCCGGTGATCGATTTCTCGGCGGAGAAGCGCGGGAAAGTGTTGCCAGCTAGCTCCGTCAGCAAAGCCAAATTCCAGTTGGAGAATTTAGGCCAATGGGTTGCATGCTCAGTTGGTGCTAATTTTACACCCCATATCATCACTGTTAATTCTGGAGAGGATGTTACTATGAAGATAATATCATTTTCTCAGCAAGGACCGCGAGCTATATGCATTCTTTCTGCAAATGGAGTCATATCAAGTGTCACCCTTCGTCAGCCTGATTCTTCTGGAGGCACATTGACATATGAGGCTAATTTTTTCCGTTTCATATATAGCACGGCATTTACTTTTCCTTGCTTTGGTTTTGGAATTATTGCTTCTGCTATTCGCTTTGTAAAAGAGATTTCTGCAACTACAAACTGCACCATTATTGTCTCTGCTGGACGGTTTGAAATTCTATCTTTGTCTGGCTCATTCATGCCAAGTGAAAGTGGTGGAACACGGAGCAGATCTGGTGGCATGAGCGTTTCTTTAGCGAGTCCAGATGGACGTGTTGTAGGCGGTGGGGTAGCTGGTCTATTGGTGGCTGCAAGTCCTGTGCAGGTTGTGGTAGGCAGTTTTCTGGCAGGTGACCAACATGAGGAGATGCAAAAAAAACATAAACATGAGGTGATATCAACAACAGTAACACCAACTGCAGCTGTTCCCGTGTCTATTGCTGATCCAATACCTAATCTCTCATCTTCGCCTTCCTTCCGGGGAGATAATTGGTCTGCAACGCGAGCAGTGGCGGAGACCAGGAATAACCCAACTGACATTAATGTGTCACTTGCCGGAGGTTAA 1083 0.4912 MEGVSSGGVTVVGSDAPSNYHVAPRTETPASAAGSVTVPAAKGSIQPPQPAATTVPAKKKRGRPRKYGPDGSVTLALSPKPISSAPPPVIDFSAEKRGKVLPASSVSKAKFQLENLGQWVACSVGANFTPHIITVNSGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEANFFRFIYSTAFTFPCFGFGIIASAIRFVKEISATTNCTIIVSAGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGDQHEEMQKKHKHEVISTTVTPTAAVPVSIADPIPNLSSSPSFRGDNWSATRAVAETRNNPTDINVSLAGG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00044 360 CDD DUF296 129 264 IPR005175 -
Sebi155g00044 360 MobiDBLite consensus disorder prediction 1 80 - -
Sebi155g00044 360 Pfam Plants and Prokaryotes Conserved (PCC) domain 130 287 IPR005175 -
Sebi155g00044 360 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 301 - -
Sebi155g00044 360 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 329 IPR039605 GO:0003680
Sebi155g00044 360 Gene3D - 130 309 - -
Sebi155g00044 360 ProSiteProfiles PPC domain profile profile. 125 308 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00044 Sebi-Chr155 436858 441305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00044 5 357 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 54.264 1.73e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00044 - - gmx:100801730 414.075