Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00025 ATGAACGCTTTCACACATGTTCCTCCTGGGTTTCGTTTCCATCCCACTGATGAAGAACTTGTTGATTACTACCTTAGGAAAAAGGTAGCTTCTAAAAGGATTGATCTAGATATCATAAAAGATGTAGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAATTGTGCAAAATAGGAACGGATGAACAAAACGATTGGTATTTCTTTAGTCATAAAGATAAGAAGTACCCAACAGGCACTCGTACGAACAGAGCTACAAAGGCAGGATTCTGGAAGGCAACAGGAAGGGACAAGGCAATATACTCAAGCAGGCAGCATTCCCTTATTGGCATGAGAAAGACTCTTGTGTTTTACAAAGGAAGAGCCCCAAATGGACAGAAATCTGACTGGATCATGCATGAGTACCGCCTAGAAACTAATGAAAATATTAATGGAACTACTTCTCAGGAAGAAGGGTGGGTTGTATGCAGAGTGTTCAAGAAAAGAATCACTACAGTAAGGAAGTATGATCATGACCACCTCTCATTCATGCAAGACCTTCAATCTTCCGCATCCCCAAGGGGACTAGTTTGTGATCATAATTCTCGCCCTTATGCATTCAAGCAGGAGTTGGAATTGCAATACCATGACGCTTTCCTCCAACTTCCACAACTAGAAAGCCCCAAAGTTAATAATACTCAATCTTGTAGCCCTCTTGTCCCTTATGCCTATGATAGCAATCATAATGGAAGTGATGCTTTGCAGTCCTCATCACTCACTCATGAACAACGATGCCAGCAATTGCTTTATGGTAGCAAAGGTGTGGACCAAATGACTGATTGGCGAGTACTTGACAAATTTGTTGCTTCTCAGCTCCAAGATGTTTCCAATGGGCAGGCTGAGGCTGAACAAATTACTTTGCTAGCAAACGCCTCCACAAAACAGGAAATTGGGCAGGAATATGCTTCAACCTCCACCTCCAGTTGCCAGATTGATCCCTGGAAGTGA 987 0.4225 MNAFTHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDIIKDVDLYKIEPWDLQELCKIGTDEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSSRQHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENINGTTSQEEGWVVCRVFKKRITTVRKYDHDHLSFMQDLQSSASPRGLVCDHNSRPYAFKQELELQYHDAFLQLPQLESPKVNNTQSCSPLVPYAYDSNHNGSDALQSSSLTHEQRCQQLLYGSKGVDQMTDWRVLDKFVASQLQDVSNGQAEAEQITLLANASTKQEIGQEYASTSTSSCQIDPWK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00025 328 Gene3D NAC domain 16 164 IPR036093 GO:0003677|GO:0006355
Sebi155g00025 328 ProSiteProfiles NAC domain profile. 7 161 IPR003441 GO:0003677|GO:0006355
Sebi155g00025 328 FunFam NAC domain-containing protein 16 165 - -
Sebi155g00025 328 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 248 - -
Sebi155g00025 328 Pfam No apical meristem (NAM) protein 8 137 IPR003441 GO:0003677|GO:0006355
Sebi155g00025 328 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00025 Sebi-Chr155 256570 257704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00025 1 325 NAC Transcription Factor Family AT1G62700 54.433 5.75e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi155g00025 NAM 1.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00025 - - pvy:116105603 452.981