Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00022 ATGCATTCTAGTGTATTAACTTATTCGCAACCAGATTCACCCCTCTCCCCTGGGAAGTATTCAAGGAAGAGTCTTGATGATGTTCGCTCCAATGGTTGGTTGGATGCCATGAAGGCCTCTTCACCTCCAAGAAAGAAGTTACCTAAAGGTTCAAATTTTCAGGTTGCTTCCATTGACTATGACATTGAAGAATATCGCTCATTCATGGTTGATTATCCTTCAGCATTAGACTCGTTTGAGGAAATTATTGACCGTGCAAAGAATAAGAAGGTTGCAGTGTTTCTGGATTATGATGGCACTCTTTCGCCAATAGTAGATGACCCTGACTCTGCCTTTATGTCTCAAGCTATGCGTACCACTGTGAGAAGCGTGGCAAGGTATTTTCCCACGGCAATTATCAGTGGAAGAAGCCGTGACAAGGTTTTTGATCTAGTTAAACTAACGGAACTCTACTATGCTGGTAGCCATGGAATGGACATTATTGGCCCTTTTAGTCAGACTCCGTCCACTGATCATCAGGGGAAAGAGACAACTCTCTTTCAACCTGCAAGAGAATTCCTGCCTATGATTGATGAGGTTTTTAGAACCCTCGTTGAGATTACTAAAGATATAATGGGTGCAAAAGTCGAAAATCACAAGTTTTGCGTTTCTGTACATTACCGTAACGTAGAAGAGAATAGTTGGACAACAATTGGACAACGTGTTCATGATATGTTGAAAAATTACCCTCCTTTACGTTCCACCCACGGACGGAAGGTTTTAGAGGTTCGTCCTGTGATTGACTGGAACAAAGGAAAAGCTGTTGAATTTTTACTTGAATCTCTAGGGTTAAATAATGATTGGGATGATGTGCTTCCTATCTACATTGGAGATGACAGAACCGATGAAGATGCTTTCAAGGTGCTGCGTGAGAGCAATCGAGGTTGTGGGATTTTGGTTTCATCAGTGAAGAAAGAAAGCAGCGCCTTCTACTCTCTCCGAGACCCAACTGAGGTCATGAAATTTCTCCAACTTCTGGTGAATTGGAAGCGGCCAGAAATAGAAGGAAAGTATGGGGAGAAGTAA 1065 0.4225 MHSSVLTYSQPDSPLSPGKYSRKSLDDVRSNGWLDAMKASSPPRKKLPKGSNFQVASIDYDIEEYRSFMVDYPSALDSFEEIIDRAKNKKVAVFLDYDGTLSPIVDDPDSAFMSQAMRTTVRSVARYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPFSQTPSTDHQGKETTLFQPAREFLPMIDEVFRTLVEITKDIMGAKVENHKFCVSVHYRNVEENSWTTIGQRVHDMLKNYPPLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLNNDWDDVLPIYIGDDRTDEDAFKVLRESNRGCGILVSSVKKESSAFYSLRDPTEVMKFLQLLVNWKRPEIEGKYGEK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00022 354 MobiDBLite consensus disorder prediction 1 26 - -
Sebi155g00022 354 NCBIfam HAD-IIB family hydrolase 93 303 IPR006379 -
Sebi155g00022 354 MobiDBLite consensus disorder prediction 1 17 - -
Sebi155g00022 354 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 18 345 IPR044651 GO:0004805|GO:0005992
Sebi155g00022 354 FunFam Trehalose 6-phosphate phosphatase 183 259 - -
Sebi155g00022 354 Pfam Trehalose-phosphatase 94 329 IPR003337 GO:0003824|GO:0005992
Sebi155g00022 354 Gene3D - 195 350 IPR023214 -
Sebi155g00022 354 Gene3D - 91 179 IPR023214 -
Sebi155g00022 354 SUPERFAMILY HAD-like 92 343 IPR036412 -
Sebi155g00022 354 CDD HAD_TPP 92 334 - -
Sebi155g00022 354 NCBIfam trehalose-phosphatase 89 340 IPR003337 GO:0003824|GO:0005992
Sebi155g00022 354 FunFam Trehalose 6-phosphate phosphatase 189 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00022 Sebi-Chr155 231403 233689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00022 87 339 Trehalose Biosynthesis Gene Families AT1G70290 27.341 4.05e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00022 K01087 - qsa:O6P43_024315 521.161