LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi155g00021	ATGTGTTCTCATCAACGACACGCTAACATGGTTGGCCTCAACTCAGTTCCTATTCCTAATTGGCTTCTCATTCTCAAGGAAGAGAAGTTTTTCACTCCTTGTTTGATTCATGACTCTGTAAAGAAGAACGAAAAGAATATTTTTTGCTTAGATTGCTGCACGAGCATTTGCCCCCACTGTTTGCCCCTTCACAACCCTCACGTCCTTCTGCAGATACGAAGATACATGTACAATGATGTATTACAGCTTGGTGATGCTCAGAGATTGTTGAATTGTTCCCTTGTTCAACCTTACACAACAAATAGAGCCAAGGTTGTGTTTTTGAAACAAAGGCCAACCTCTCGCTCTCTTAGGGGCTCTGGCAACCTTTGCATCATATGTCACCGTTGCCTCCAAGACCCATACATCTTCTGTTCTGTGTCATGCAAGGTGCAGCAGCATCTTCTAATAATTACCAAAAACACAACCATAAAGGAGTGTTGCTCTGTTCTCCAAGAAATTGATGATAGCCAAATCACCTCAGATTCGGTCCTAGACTCACCCACGTCAACGTCGTTATGCACTGTGTCCGGATCAACAAGCGCTACTATTAGTGGGAGTGTGGCAGAGAGCTTGAAGAGCACGACTAATTATAGCACTGCTGAGTTACGCAAAAAGAAACGTAGCAGTGTTGAGATGGTGCCACGGATTCCGTACTCACCTGCAACAGAGCTAGGTGCTGTGGTGAACCGGCGTAAAGGTGTCCCTCACAGATCACCACTGTACTAA	768	0.4492	MCSHQRHANMVGLNSVPIPNWLLILKEEKFFTPCLIHDSVKKNEKNIFCLDCCTSICPHCLPLHNPHVLLQIRRYMYNDVLQLGDAQRLLNCSLVQPYTTNRAKVVFLKQRPTSRSLRGSGNLCIICHRCLQDPYIFCSVSCKVQQHLLIITKNTTIKECCSVLQEIDDSQITSDSVLDSPTSTSLCTVSGSTSATISGSVAESLKSTTNYSTAELRKKKRSSVEMVPRIPYSPATELGAVVNRRKGVPHRSPLY	255

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi155g00021	255	Pfam	PLATZ transcription factor	73	144	IPR006734	-
	Sebi155g00021	255	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	19	254	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi155g00021	Sebi-Chr155	222695	223870	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Sebi155g00021		PLATZ	7.1e-22	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi155g00021	-		-	gmx:100806286	328.176