Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi154g00114 ATGCTTTTGTGTTTGCATCTCTTGCAACCACAGGGTTGTGATGGTTCAATACTTCTAGATCCCACACCGTCCATTGACAGTGAAAAGAATGCAGGGCCTAATTTTCAGTCTGCTAGAGGATTTGAAGTGGTGGATGAAATCAAGAAGGCTGTGGATGCAGCATGTGGAAAACCAGTTGTTTCTTGCGCTGACATCTTGGCTGTTGCTGCTCGGGGGCCAAAATGGAAGGTGAGAGTTGGGAGAAGAGACTCAACCACAGCAAGCCGTGCTGCTGCAAATGCTAACATTCCAGCACCGTTTTTCAGCCTTTCTCAACTTATCGACAACTTCAAGAAACATGGCTTAAATGAGAAGGACCTGGTGGCTCTTTCTGGAGCACACACAATTGGATTTGCACGTTGTGCTACGTTTAGGGACCGTATCTATAATGACTCTAACATCAATCCTTACTTTGCAAAAACGCTTAAACACATTTGCCCCAGAAAAGGAGGTGATTTCAACCTTGCTCCTTTGGACACAACACCAGCACACTTTGATAAAGCCTACTTCTCTGATTTGGTTCAAAAGAAAGGGGTTCTTCACTCTGATCAGGAACTCTTCAATGGTGGTTCTACTGATGCTTTGGTTAGAAAATATAGCCACGATACCAAAACTTTCTACAAGGACTTTGTAAAATCTATGATTAAGATGGGAAATATAAAGCCCCTCACTGGATATCAAGGTGAAATTCGTCTCAACTGCAGGAAAGTGAACTAA 756 0.4312 MLLCLHLLQPQGCDGSILLDPTPSIDSEKNAGPNFQSARGFEVVDEIKKAVDAACGKPVVSCADILAVAARGPKWKVRVGRRDSTTASRAAANANIPAPFFSLSQLIDNFKKHGLNEKDLVALSGAHTIGFARCATFRDRIYNDSNINPYFAKTLKHICPRKGGDFNLAPLDTTPAHFDKAYFSDLVQKKGVLHSDQELFNGGSTDALVRKYSHDTKTFYKDFVKSMIKMGNIKPLTGYQGEIRLNCRKVN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi154g00114 251 Pfam Peroxidase 11 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 SUPERFAMILY Heme-dependent peroxidases 10 251 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 PRINTS Haem peroxidase superfamily signature 119 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 PRINTS Haem peroxidase superfamily signature 71 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 Gene3D - 10 248 - -
Sebi154g00114 251 PRINTS Plant peroxidase signature 225 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 PRINTS Plant peroxidase signature 59 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 PRINTS Plant peroxidase signature 185 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 PRINTS Plant peroxidase signature 169 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 PRINTS Plant peroxidase signature 118 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 PRINTS Plant peroxidase signature 39 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 Gene3D Peroxidase, domain 2 97 230 - -
Sebi154g00114 251 CDD secretory_peroxidase 10 250 IPR033905 GO:0004601|GO:0042744
Sebi154g00114 251 FunFam Peroxidase 97 230 - -
Sebi154g00114 251 PANTHER PEROXIDASE 72-RELATED 11 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi154g00114 251 ProSitePatterns Peroxidases proximal heme-ligand signature. 119 129 IPR019793 -
Sebi154g00114 251 ProSiteProfiles Plant heme peroxidase family profile. 1 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi154g00114 Sebi-Chr154 1625153 1626513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi154g00114 1 251 Peroxidase AT5G05340 59.004 9.49e-103 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi154g00114 K00430 - gmx:100812820 391.734