Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi154g00105 ATGGCTTCTGAGCAACGTAAAAAAGCAGCTATGCAGCGCAAGTTGCAACAACTTCGATCCGTCACAAATTCCAGTGCTGTGAACAAAGCCTCAATTATTGTGGATGCCACCAGATACATAGAGGAGTTGAAGCAAAAAGTGGAGGGATTGAACTCTGAGCTTGAAACCGCTGAATCCTCATCTACCTCCCAAGATAAACTACCTATGGTCACCGTAGAAACCCTAGAAAAGGGTTTCCTTATTAATGTGTTTTCAGAAAGGAATTGCCCTGGTATGCTTGTGGCAATACTTGACGCCTTTGAAGAACTGGGACTTGATGTGCTTGATGTTAGGGTTTCTTGTGAAGACACTTTCCAGCTAGAAGCTGTGGGAGGAGAAAGTCAAGAGAATGAGAGCATCGACGCGCAAGTGGTGAAGCAAGCAGTGCTTCAAGCAATCAACAACATGGATTAA 453 0.4437 MASEQRKKAAMQRKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVEGLNSELETAESSSTSQDKLPMVTVETLEKGFLINVFSERNCPGMLVAILDAFEELGLDVLDVRVSCEDTFQLEAVGGESQENESIDAQVVKQAVLQAINNMD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi154g00105 150 Gene3D - 1 68 IPR036638 GO:0046983
Sebi154g00105 150 Coils Coil 33 60 - -
Sebi154g00105 150 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 146 - -
Sebi154g00105 150 Coils Coil 1 21 - -
Sebi154g00105 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 58 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi154g00105 Sebi-Chr154 1535762 1538974 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi154g00105 1 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 29.032 1.83e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi154g00105 - - ccaj:109816195 252.677