Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi154g00082 | ATGGATGATAAACGTGGAACATCTCATCTCAAAACTAATGATCATTTTCGAATTGAAGTTGATAGCTTTTCACCTCCTTCTTCAATGCCCTTTTCTCCCTCATCAATTTTTGCTTCTTACTCTGATTTTCCACCTGGTTTCAGCCCAACAGCGTTGTTTAATTCACCTCTGTTTCTCTCTTCTCCTAATATGGCTGCACCTTATACAACTGCTGAGCCTTCTTCTGGTCAGACTCAGAGCTTCAACCAGAGAAACAGTTCAACTGAACAACATAACAACAAGGAAGAAGAGAGAAAGTACTCTGACATCTCTTTCCAGACCCAAACAAAGCAGCAAGTGCCTCTCTTTCAATCTTCCCCAAGCATGTTTCAAGCAGAGCCAATAAAGAAACAGGACAAGTTGATATTCAATGAAACTACAAAGCAAACCGATTTTTCATTTCAGAGGACGGCAACAAAATCTGAGAATCCATCCACTCAAGGCTTCTCCTCAGAACTGGCCACAATCAAACCTGAAATACAAAGCATTTCTGCTTCTGGGTCTGGTTATTCAAACTACACAAATGCTTCTATGTCTATTAGAGAACAAAGGAAATCAGAAGATGGGTACAAGTGGAGGAAATATGGAGAGAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTACAAGTGCACACATTCAAGTTGTCCAATGAAGAAAAAAGTTGAAAGGTCTTTGGATGGACATATTACTGAAATAGTATACAAAGGAAGTCATAACCATCCCAAGCCACAGTCTACCAAAAGAACAAATTCTCACTCAATTCATCAACCCTCTTCATCATGTACTAACTCAGGGATTTCTGATCATTCTATGGGAGAGGAAGACTTTGAGCAAACATCACATACTAGTTATTGTGGAGGGGATGATGATGACCTTGGACCAGATGCCAAAAGATGGAAGGGAGAGAATGAAAATGATGGCTATTCCTATTCAACTGCAGGGAGTAGAACTGTTAAGGAGCCTAGAGTTGTGGTTCAAACCACAAGTGAAATTGATATACTTGATGATGGCTATAGGTGGAGGAAATATGGACAGAAAGTGGTCAAAGGAAACCCAAATCCAAGAAGCTACTATAAATGTGTAACCCCTGGTTGTCCAGTGAGAAAACATGTTGAGCGAGCTGCACATGATATGAAAGCTGTGATAACAACTTATGAAGGGAAACACAACCATGATGTGCCTGTAGGGCGAGGAAGTGCAAGCTATGGCATGAACAGGAACAACAACACCAACAATGTTACTGCCCCTGCCCCTATAAGGCCCTCACTGGTGACTAATTATTCTAGCTCAGCAAGTTTGACAAATTCACTTCATGATACAAAGTTACCAACTTCTGGAAGTCAAGAACCTTTTCAGCTTGACATGCTTCTGAGCCCTGGAAGCTTTGGATTTGCAGCTCTGGACAGATCAATGAGTTCATATGCCAATCCTGAACAATACTCAGATGCTACATTCTCTAAGGATGACTCATTCCTTCAATCTTTTCTCTCAAAGAACTTCTAA | 1548 | 0.405 | MDDKRGTSHLKTNDHFRIEVDSFSPPSSMPFSPSSIFASYSDFPPGFSPTALFNSPLFLSSPNMAAPYTTAEPSSGQTQSFNQRNSSTEQHNNKEEERKYSDISFQTQTKQQVPLFQSSPSMFQAEPIKKQDKLIFNETTKQTDFSFQRTATKSENPSTQGFSSELATIKPEIQSISASGSGYSNYTNASMSIREQRKSEDGYKWRKYGEKQVKGSENPRSYYKCTHSSCPMKKKVERSLDGHITEIVYKGSHNHPKPQSTKRTNSHSIHQPSSSCTNSGISDHSMGEEDFEQTSHTSYCGGDDDDLGPDAKRWKGENENDGYSYSTAGSRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVTPGCPVRKHVERAAHDMKAVITTYEGKHNHDVPVGRGSASYGMNRNNNTNNVTAPAPIRPSLVTNYSSSASLTNSLHDTKLPTSGSQEPFQLDMLLSPGSFGFAALDRSMSSYANPEQYSDATFSKDDSFLQSFLSKNF | 515 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi154g00082 | 515 | Pfam | WRKY DNA -binding domain | 350 | 406 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | Pfam | WRKY DNA -binding domain | 200 | 256 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | MobiDBLite | consensus disorder prediction | 303 | 319 | - | - | |
Sebi154g00082 | 515 | MobiDBLite | consensus disorder prediction | 89 | 103 | - | - | |
Sebi154g00082 | 515 | MobiDBLite | consensus disorder prediction | 63 | 88 | - | - | |
Sebi154g00082 | 515 | SMART | WRKY_cls | 199 | 257 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | SMART | WRKY_cls | 349 | 408 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | FunFam | WRKY transcription factor | 187 | 259 | - | - | |
Sebi154g00082 | 515 | ProSiteProfiles | WRKY domain profile. | 200 | 258 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | ProSiteProfiles | WRKY domain profile. | 344 | 409 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | MobiDBLite | consensus disorder prediction | 63 | 116 | - | - | |
Sebi154g00082 | 515 | Gene3D | WRKY domain | 185 | 259 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | SUPERFAMILY | WRKY DNA-binding domain | 341 | 409 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 64 | 427 | IPR044810 | GO:0003700 | |
Sebi154g00082 | 515 | MobiDBLite | consensus disorder prediction | 254 | 284 | - | - | |
Sebi154g00082 | 515 | FunFam | WRKY transcription factor 33 | 336 | 402 | - | - | |
Sebi154g00082 | 515 | SUPERFAMILY | WRKY DNA-binding domain | 195 | 258 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | Gene3D | WRKY domain | 336 | 402 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi154g00082 | 515 | MobiDBLite | consensus disorder prediction | 248 | 329 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi154g00082 | Sebi-Chr154 | 1212311 | 1215594 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi154g00082 | 147 | 480 | WRKY Transcription Factor Family | AT2G38470 | 52.432 | 2.61e-106 | 325 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Sebi154g00082 | WRKY | 1.3e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi154g00082 | K13424 | - | gmx:100127367 | 688.337 |