Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi154g00079 ATGGGAGCGTGTTGCAGCTGCCAAGTTTCATTTGTAGGAAAGGTGCATGATGAACAATATGAATCAAACCATAACAATGACACTGCATATGAACATGGTGGGGCCCGGGTCTTGTTGAGAGGAGCCTCTAACTTTGTATCAATGTACAGCCAAAGGGGTACAAAAGGAGTTAATCAAGATGCATTGACAGTTTGGGAGGACTTCACTGGAGAAAAAGACATGATCTTTTGTGGTGTGTTTGATGGTCATGGTCCTCTAGGACACAAGTTTTCACACTGTATACGTGAAAATCTACCCTCCAAACTCTCTTCAGCAATCAAACTCACACAAGAAAGGGTTTGCAAACACTATGATGCTAATGTTGCAAACACAGACAGTAATGATGATGTCTATGATGATGAGGATAACCAACACTTGTCCTTTGCTTCATGGGAGGGATACTTCCTGAGGTCCTTCAAAGAAATGGATCAATACCTTGCTAGTAACATTGACACTGATGGTTATTGTGGTGGTAGCACTGCTGTAACTGTAATTAAACAGGGTGATCAGCTGATAGTTGGTAATTTGGGGGATTCTCGTGCAGTTCTTTGCACAAGAGCAGATGACAACCAGCTTATTCCTGTTCCACTTACTGTTGATTTGAACCCAGATATTCCAACTGAAGCTTCAAGGATCATCAATTGTGGAGGTAGAGTTTTTGCTGCAGAAGAAGATCCGGGTGTAAACAGAATGTGGATGCCTGAAGGTGACTGCCCTGGATTAGCTATGTCAAGAGCCTTTGGAGATTTTTGCCTAAAAGACTATGGCCTCTCCTCAGTTCCTGATGTATCTTATAGAACACTTACCAAAAGGGATGAATTTGTGGTTTTGGCTAGTGATGGGATATGGGATGTGCTGACAAACAATGAAGTGATAAACATAGTTGCTTCAGCACCAAAGAGGTCCATGGCAGCCAAATTGTTAGTAAAGCGTGCTGTTCAGGCTTGGAAATGCAAGAATCCTTGTTACCATGTTGATGATTGTACAGCCATATGCTTGTTCCTCAATGATGAGCCTGTTTTAAACCCATTCCCAGTCCAATGTGAGAGGAAATAA 1095 0.4219 MGACCSCQVSFVGKVHDEQYESNHNNDTAYEHGGARVLLRGASNFVSMYSQRGTKGVNQDALTVWEDFTGEKDMIFCGVFDGHGPLGHKFSHCIRENLPSKLSSAIKLTQERVCKHYDANVANTDSNDDVYDDEDNQHLSFASWEGYFLRSFKEMDQYLASNIDTDGYCGGSTAVTVIKQGDQLIVGNLGDSRAVLCTRADDNQLIPVPLTVDLNPDIPTEASRIINCGGRVFAAEEDPGVNRMWMPEGDCPGLAMSRAFGDFCLKDYGLSSVPDVSYRTLTKRDEFVVLASDGIWDVLTNNEVINIVASAPKRSMAAKLLVKRAVQAWKCKNPCYHVDDCTAICLFLNDEPVLNPFPVQCERK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi154g00079 364 PANTHER PROTEIN PHOSPHATASE 43 346 IPR015655 GO:0004722|GO:0006470
Sebi154g00079 364 Gene3D - 41 350 IPR036457 -
Sebi154g00079 364 ProSiteProfiles PPM-type phosphatase domain profile. 45 348 IPR001932 -
Sebi154g00079 364 SMART PP2C_4 36 346 IPR001932 -
Sebi154g00079 364 SUPERFAMILY PP2C-like 43 350 IPR036457 -
Sebi154g00079 364 CDD PP2Cc 44 348 IPR001932 -
Sebi154g00079 364 Pfam Protein phosphatase 2C 74 327 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi154g00079 Sebi-Chr154 1173975 1175948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi154g00079 1 352 PP2C-type Phosphatase Gene Family AT5G01700 48.889 9.06e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi154g00079 - - cam:101501265 522.702