Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi154g00072 ATGGGAAACAATAGTTGGCATGTCAAAGATTTCCACACAGACCCATTTCAAAAACTCTTCTCTTTTGCAAATGGTGATAGAAGGAAGAAATGGAGGATTCATGAGGGTGGTTTCATTAGCTTAGCCCTTTTCCTGTTTCTTCTGCAGGCTCTGGCTTCCAACATTCAACCTGTCTCAGGCCATTTGTGGGATGGGGTGGTTGTCACCCAAGCAGATTATCAAGCTCTGAGGGCTATTAAGCATGAGCTGATTGACTTCAAAGGGGTTCTGAGAAGCTGGAATGACAGTGGTTTAGGTGCTTGTTCTGGTGGGTGGGCAGGAATCAAATGTGTGAAAGGAGAGGTTATTGCAATTCAGCTTCCTTGGAGAGGTTTGGGTGGCCGTATATCAGAGAAAATTGGGCAGCTTCAATCTCTCAGGAAGCTCAGTTTCCATGACAATGTTCTTGCTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGAGTTTATCTCTTCAATAACAGGCTTTCAGGTTCTATTCCTCCTTCTATTGGCAATTGTCCAATGCTTCAGTCTTTTGATGTTAGCAATAATGCCCTCACTGGTAAAATCCCTCCTAGTTTAGCAAACTCCAATAGGATATTCAGGATTAATTTGAGTTTCAACTCACTTTCTGGATCCATTCCTAACAGTTTCACTCTGTCTCCTTCTCTAACTGTTCTTGCTCTCCAACACAACAATCTTTCTGGTTTTATCCCTGATAATTGGGGTGGAAAGGGAAAGAAAGCTTCCCAACTTCAGGCATTGACCCTTGATCACAATCTCTTTTCTGGAACCATCCCAGTTTCTCTAAGCAAGTTGGCTTTGCTTGAAAATGTTTCTTTAAGTCATAACCAGATTGTAGGACCTATTCCAAGTGAACTAGAGAGCAATCAACTTGAAAACCATATCCCAGATACCTTGGACAGGTTACACAACCTTTCTGTGCTTAACCTGAAGAACAACAAGCTTGATGGCCAAATCCCATCAACAATTGGAAACATCTCAAGCATTAGCCAAATTGATTTATCAGAAAATAAATTCCTGGGAGAAATTCCAGATTCCCTTACCAAACTTGCAAATCTCAGTTCATTCAATGTATCTCACAACAATCTATCTGGTCCTGTCCCATCTCTACTTTCCAAAAGATTCAATGCTAGCTCATTTGCAGGGAATCTTGAGCTATGTGGGAAAAGAGCTGCTTCAAGCAGAAAGAGTGGCAAGACTGCTAAGGCCACAGCATCTTCCAGGAGTGTTGAAAAAGGTGCTCCAGCTGGTGGTGAAGTTGAATCAGGAGGTGAAGCTGGTGGGAAACTAGTTCACTTTGATGGGCCATTTGTATTTACTGCTGATGATCTCTTGTGTGCCACTGCTGAGATAATGGGAAAAAGTGCATATGGAACAGCATATAAGGCAACACTGGAAGATGGGAACCAAGTTGCTGTGAAAGGACCCAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGACCAAAGGAAGCCTAGCATCATTCCTTCATGCTCGTGGGCCTGAAATTGTCATTGAATGGCCAACAAGGATGAAAATAGCAATTGGAGTCACACATGGTCTGTGCTACCTTCATAACCAAGAGAATATAGTACATGGGAATCTTACCTCTAGCAATATACTATTAGATGAACAGACAAATGCCCATATCACAGATTTTGGACTTTCAAAGCTAATGACAGCATCTGCCAACACCAACATCATTGCTACAGCAGGAAGTCTTGGCTACAATGCACCAGAGCTTTCAAAGACAAAGAAGCCTAACACAAAGACTGATGTGTACAGCCTTGGTGTCATCATTTTGGAGCTCCTAACTGGTAAACCACCTGGGGAGCCAACCAATGGCATGGACTTACCTCAATGGGTGGCATCCATAGTAAAAGAGGAGTGGACAAATGAAGTGTTTGATTTGGAACTCATGAGGGATGCACCAACTATAGGTGATGAGCTTCTTAATACATTGAAATTGGCTCTTCATTGTGTGGATCCATCTCCAGCTGCTAGGCCAGAAGTTAAGCAAGTTTTGCAGCAATTAGAGGAGATCAAACCAGACTTGGCTGCAGGGGATGAGGGAGATAAGGAGGTCCAACAACAACTGAATAAATAG 2163 0.4286 MGNNSWHVKDFHTDPFQKLFSFANGDRRKKWRIHEGGFISLALFLFLLQALASNIQPVSGHLWDGVVVTQADYQALRAIKHELIDFKGVLRSWNDSGLGACSGGWAGIKCVKGEVIAIQLPWRGLGGRISEKIGQLQSLRKLSFHDNVLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPMLQSFDVSNNALTGKIPPSLANSNRIFRINLSFNSLSGSIPNSFTLSPSLTVLALQHNNLSGFIPDNWGGKGKKASQLQALTLDHNLFSGTIPVSLSKLALLENVSLSHNQIVGPIPSELESNQLENHIPDTLDRLHNLSVLNLKNNKLDGQIPSTIGNISSISQIDLSENKFLGEIPDSLTKLANLSSFNVSHNNLSGPVPSLLSKRFNASSFAGNLELCGKRAASSRKSGKTAKATASSRSVEKGAPAGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKGPKGEKLLVFDYMTKGSLASFLHARGPEIVIEWPTRMKIAIGVTHGLCYLHNQENIVHGNLTSSNILLDEQTNAHITDFGLSKLMTASANTNIIATAGSLGYNAPELSKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVKQVLQQLEEIKPDLAAGDEGDKEVQQQLNK 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi154g00072 720 Gene3D Ribonuclease Inhibitor 208 305 IPR032675 -
Sebi154g00072 720 SUPERFAMILY Protein kinase-like (PK-like) 469 702 IPR011009 -
Sebi154g00072 720 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 494 700 - -
Sebi154g00072 720 MobiDBLite consensus disorder prediction 416 442 - -
Sebi154g00072 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 69 253 - -
Sebi154g00072 720 SUPERFAMILY RNI-like 118 392 - -
Sebi154g00072 720 Gene3D Ribonuclease Inhibitor 68 207 IPR032675 -
Sebi154g00072 720 Gene3D Transferase(Phosphotransferase) domain 1 506 717 - -
Sebi154g00072 720 Pfam Protein tyrosine and serine/threonine kinase 496 697 IPR001245 GO:0004672|GO:0006468
Sebi154g00072 720 FunFam Pollen receptor-like kinase 1 506 711 - -
Sebi154g00072 720 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 303 414 - -
Sebi154g00072 720 Pfam Leucine rich repeat N-terminal domain 71 110 IPR013210 -
Sebi154g00072 720 ProSiteProfiles Protein kinase domain profile. 405 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi154g00072 720 Gene3D Ribonuclease Inhibitor 306 407 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi154g00072 Sebi-Chr154 1061143 1063820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi154g00072 61 714 Receptor kinase-like Gene Family AT3G51740 53.750 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi154g00072 PK_Tyr_Ser-Thr 2.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi154g00072 - - gmx:100819102 995.342