Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi154g00046 ATGGCAATGGAAGTTACTCAAGTTCTTTTGAATGCTCAATCCATTGATGGAACTGTACGGAAGCATGCCGAAGAAAGTCTGCGACAATTTCAGGAGCAAAACCTTCCTGGTTTCTTGGTCTCTCTCTCTGGAGAGTTAGCAAGTGAAGATAAGCCAGTTGATAGCCGAAAGTTGGCAGGTTTGATACTTAAAAATGCATTAGATGCCAAGGATGAAAACAGAAAGCGGGAATTGTCTACAGCTACTCAAGTTATTGCTAAAGTTGCTGGAATTGAGCTTCCTCAGAAACAGTGGCCTGAGCTGATAGGATCGCTTTTATCAAATATTCACCAAGTTCCATCTCATGTCAAGCAAGCAACTTTGGAGACTCTGGGGTATTTGTGTGAGGAAGTCTCTCCTCAGGTTGTTGATCAAGACCAAGTAAATAAAATTCATACTACTGTAGTTCAAGTTGGAAGGACTAAGTCTAAGATCATTAGGAGAATATGCATACCCTTCCAAAGCATGTCAAAGCAAGCAAATTGTGTCATTGTCTCTGTGGAGTACCATTTGGCCCCTGAGAACCCTCTTCCTTCTGCATATGATGATGGTTTCAATGTTCTCATGTGGCTGAAAAGAGAAGGTCTAAATGGCTGTTCAAGTGTGCAAAATTGGTGGAAAGGAACTAATGAGATAACTACAAGATGGACCGTGGTTATGAGATTCGCGTTACTTCCCTGGAAACCAGAATTGGTCTTCACTGGAACCTCTGTTATGGGCATTAACCCAGAAAATGGCAAGTTTTGTAGCCATGTGGACTGTTGGGATTCAATAGAGAAAAATGACTACTTTTCTCTTGAAGGATGCACCCTTGGTTATGCAATAGCAGCTATTTTGGGTTACTTGATGTTTGGTGAAGAGGTTGAATCACAGGTGACTTTGAATCTCCAAACAGGCAAGTTGAGTTCACGCATGGCAATATACACAACCTTGGGGATATTTGTTTTGGAAGACCGAGTTTTCATGTCAGTGGAGATGGATGAAAGTTGTGAGGTGACTTGA 1041 0.4169 MAMEVTQVLLNAQSIDGTVRKHAEESLRQFQEQNLPGFLVSLSGELASEDKPVDSRKLAGLILKNALDAKDENRKRELSTATQVIAKVAGIELPQKQWPELIGSLLSNIHQVPSHVKQATLETLGYLCEEVSPQVVDQDQVNKIHTTVVQVGRTKSKIIRRICIPFQSMSKQANCVIVSVEYHLAPENPLPSAYDDGFNVLMWLKREGLNGCSSVQNWWKGTNEITTRWTVVMRFALLPWKPELVFTGTSVMGINPENGKFCSHVDCWDSIEKNDYFSLEGCTLGYAIAAILGYLMFGEEVESQVTLNLQTGKLSSRMAIYTTLGIFVLEDRVFMSVEMDESCEVT 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi154g00046 346 Pfam alpha/beta hydrolase fold 167 208 IPR013094 GO:0016787
Sebi154g00046 346 Pfam Importin-beta N-terminal domain 23 78 IPR001494 GO:0006886|GO:0031267
Sebi154g00046 346 Gene3D alpha/beta hydrolase 157 223 IPR029058 -
Sebi154g00046 346 Pfam Uncharacterized conserved protein (DUF2358) 215 264 IPR018790 -
Sebi154g00046 346 Gene3D - 1 156 IPR011989 -
Sebi154g00046 346 SUPERFAMILY ARM repeat 3 163 IPR016024 -
Sebi154g00046 346 PANTHER IMPORTIN BETA 6 150 IPR040122 GO:0006606
Sebi154g00046 346 ProSiteProfiles Importin-beta N-terminal domain profile. 23 111 IPR001494 GO:0006886|GO:0031267
Sebi154g00046 346 SUPERFAMILY alpha/beta-Hydrolases 168 207 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi154g00046 Sebi-Chr154 651536 653876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi154g00046 282 324 Amino Acid or Auxin Permease AAAP Family AT5G15240 67.442 3.48e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi154g00046 K14293 - gmx:100802578 261.536