Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi154g00042 ATGGGAGTTCTCGGTGCAGACCTATGGACGACTACACTTACTCAGGCACAGGTGGAAGGCAGGAGGGCAGTGGTTATACCAGGGAGGGCTGTGACCACTTACTTCCACAACAGGCCAAAGAAGATCCGAGTTAGATTACCAGATGACCATATCAAATCGTGGGAATTGATTTGGAATCGACGAATCCCGACAGAGTGCAAAATTGGACATGGTGGGAGTGAATTTTGTACCACACATGGGCTGCAAAAGGGAGACCACATTAGGTTTTGGAAATTGGAAAATGAAGCGTTCATCAGAATCGTTCGAACAAAATCCTCAACTTAG 324 0.466 MGVLGADLWTTTLTQAQVEGRRAVVIPGRAVTTYFHNRPKKIRVRLPDDHIKSWELIWNRRIPTECKIGHGGSEFCTTHGLQKGDHIRFWKLENEAFIRIVRTKSST 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi154g00042 107 Gene3D - 6 107 IPR015300 -
Sebi154g00042 107 Pfam B3 DNA binding domain 9 101 IPR003340 GO:0003677
Sebi154g00042 107 SUPERFAMILY DNA-binding pseudobarrel domain 9 104 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi154g00042 Sebi-Chr154 628521 628934 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi154g00042 B3 1.5e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi154g00042 - K03168 mpau:ZMTM_12650 36.1946