Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi154g00041 ATGACTGTCGTTATGGATAACATTAATGAAAACGTTGGTGAGAATGTTGTTGGGTTGGAAGAAATTGAAAGTGAAGATGATTGTGAGAATGCATTTCATTTTGACTCTCGTGAATTTGTTCTTGGGGTGGATTCTGAGGCAGATTTTGTTGACCTTAATCCTGAGTTGTTAACTGAGGAAAACGGTTTTTCAGCACGAAAGGGCAAAGAACGTAAAAATGGAATGGAAGAAATTATTGAGAAGACCTATCTTTGCCATAGGGAAGGAAAGAGACCAATTAATACGAATGAAAGGACCGGGAAGAAAAAACGTGAAGCAAAGCCTGAGACAAGGTGTTTATGTCCTGCAAAAATGAAGGTTCGGTTAGATGTACATTATGGCCGTTGGAACGTGACCAAGTTTTGTGATGCCCATAATCATGAAATGTTGAACCCCAAATACACAGGGATGCTACCGGCTCATAGGAAATTGAGTGAAGCTGATATCTTGGAGATGAATAACATGCGGAATGCAAGTATTACTACACCTCAAATTTATGGGTCATTTGCCAGCCAATCTGGTGGGTACAACAATGTTGGTTTTCGGAAAAGAGATCTTTACAATGAGATTGGTAGGCAAAGAATGTTGCAGCTAAGTGATGCTAAGGGTGCAATTAAGCACCTACGTGAAAGGGAGCAGAATGAAGGGTCAATGTTTTGGAGGCACACGACTGACTCAGAAGGCCGACTCCAGCGATTATTTTGGTGTGACGGTCAGTGCCAAGTTGATTACAAATTATTTGGTGATGTCCTTGCCTTTGATGCCACATACCGTAAGAACAAATATCATTTTCCTTGGTGGTTTTCTGGCATAAACCACCATAATCAAAGCACAATATTTGCTAGTTGCCTAGTTGCAGATGAAACTGAGGAAACTTATGTTTGGGTTTTGGAACAGTTGATGGTGGCAATGAAAGGCAAGATGCCTTCAGCCGTGATAACAGATGGTGATCTTGCTATGCGGAATGCTATCAAAAGAGTGCTTCCTAATGCACACCATAGGCTTTGTGCATGGCACCTGTGTCGTAATGCTGCTAGTAATGTTAAAAATCCTAAGATGGTTTCGATGTTTAGGAAATGTATGTTGGGTGACTATGAGGTGTCTGAGTTTAAACACAGGTGGGAGGTAATGGTGAAGGAATTTCGACTTGAGGAAAAAAATTGGGTGAAGGAATTGTATGAGAAAAAGAGGATGTGGGCCACAACATACATTAGGGGAAATTTCTTTGCCGGGTTTAGGACAACGTCTCGATGTGAGGGGCTTCATGGGCAACTTGGGAAGTTTGTTCACTCCCGGACCGATTTGGTTGGTTTTCTGAAAAATTATGGTCGTTTCCTTGAAGTACTAAGGTATAATGAGTTAGAAGCAGATTTTGAATCAGTACATGGTGAAATGGTCCTTGAGACTAACTTGCATGCACTAGAGAGATCAACCTCTAAGATTTTCACAAAGGAGGTTTTCATATTGGTACGGCCCGCCCTTGCTAGGGGAAGCACTATGAGGGTCATGGGCTGTACACAGTTGATGTCACAAACCATTTTCACAGTGTCCAAGTATGGTAGATCACAGAAGGAGTGGCAAGTGTCATATATTGCAGAACCACTTTTCCTTAAATGTTCTTGTCAAAGAATGGAATCTTTGGTCTTCCTTGTGATCACATAA 1701 0.4139 MTVVMDNINENVGENVVGLEEIESEDDCENAFHFDSREFVLGVDSEADFVDLNPELLTEENGFSARKGKERKNGMEEIIEKTYLCHREGKRPINTNERTGKKKREAKPETRCLCPAKMKVRLDVHYGRWNVTKFCDAHNHEMLNPKYTGMLPAHRKLSEADILEMNNMRNASITTPQIYGSFASQSGGYNNVGFRKRDLYNEIGRQRMLQLSDAKGAIKHLREREQNEGSMFWRHTTDSEGRLQRLFWCDGQCQVDYKLFGDVLAFDATYRKNKYHFPWWFSGINHHNQSTIFASCLVADETEETYVWVLEQLMVAMKGKMPSAVITDGDLAMRNAIKRVLPNAHHRLCAWHLCRNAASNVKNPKMVSMFRKCMLGDYEVSEFKHRWEVMVKEFRLEEKNWVKELYEKKRMWATTYIRGNFFAGFRTTSRCEGLHGQLGKFVHSRTDLVGFLKNYGRFLEVLRYNELEADFESVHGEMVLETNLHALERSTSKIFTKEVFILVRPALARGSTMRVMGCTQLMSQTIFTVSKYGRSQKEWQVSYIAEPLFLKCSCQRMESLVFLVIT 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi154g00041 566 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 559 IPR031052 GO:0006355
Sebi154g00041 566 Pfam FAR1 DNA-binding domain 59 143 IPR004330 -
Sebi154g00041 566 Pfam MULE transposase domain 263 356 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi154g00041 Sebi-Chr154 620693 622464 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi154g00041 MULE 6.8e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi154g00041 - - tpra:123913749 562.762