Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi153g00053 ATGAAGCATATGATGTCCACTGATAAGGCTGGATCCTCGAGAGAAAATAGGAAGGTTGATCGTTTCGTAGCTAAGTTGACCCCTAATGAGGATATGGTGTTTATAGAGAATAAATTTTGGTTGAAGTTTCGAGGCGAAATTAGGGGTCGCAATGTTATCCTAATGGACCCTGCTGGGTTTAATTTTAATGTGTCTGTAGAGTTCCATGGAGTAGTGAATGGAAATTTGGAGGTCAATTATCCTAGGGTGGAAAGTGATGAAGATGTTGATGTCCAACCTGTGGAGTATGAGGAGGACCCTGAGGAGCCCCTATTTATGTGGGAAGTTACTTTGACAAACGCAGCTGCTTCCGGTGCTAACGCTTTGCTCATACCTGCTAGGATTGTGAGGGACAAATTGGACAAGAATCAGGATGTTGTGACTGTCATAGATGAGGGTGGTCAATTAATTCCATGCAAGCTTCTGAAGCCTAAAAGACGACCAAGTGAGCGGTACCTATCCAGTGGGTGGTATGAGTTTATTCGGGGAAAGCAATTGAAGGTTGGGGATAAGATAAGATTTTACTCAGATGATAGTATGGAATCTTTGTCTGCGGTTGTAGATCGCATTTGA 612 0.4297 MKHMMSTDKAGSSRENRKVDRFVAKLTPNEDMVFIENKFWLKFRGEIRGRNVILMDPAGFNFNVSVEFHGVVNGNLEVNYPRVESDEDVDVQPVEYEEDPEEPLFMWEVTLTNAAASGANALLIPARIVRDKLDKNQDVVTVIDEGGQLIPCKLLKPKRRPSERYLSSGWYEFIRGKQLKVGDKIRFYSDDSMESLSAVVDRI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi153g00053 203 Gene3D - 97 202 IPR015300 -
Sebi153g00053 203 SUPERFAMILY DNA-binding pseudobarrel domain 103 196 IPR015300 -
Sebi153g00053 203 CDD B3_DNA 103 192 IPR003340 GO:0003677
Sebi153g00053 203 ProSiteProfiles B3 DNA-binding domain profile. 107 203 IPR003340 GO:0003677
Sebi153g00053 203 Pfam B3 DNA binding domain 108 195 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi153g00053 Sebi-Chr153 1412315 1413739 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi153g00053 B3 3e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi153g00053 - K05030 vvo:131623036 59.6918