Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi153g00052 ATGAATCAGTATTTGATAGAACAAGGTGATAAGGGTCCAGCCATAGTTATATTACAATTGTGCAAGCTGAAAGTATTTAAAGGCACAAAGGGCATTTCAAATGCATTTAATGAGACTAAGCTGCTTATTAATCCAAACTTCAAGGAGGATCTTCAATATAAAGAAAAGTTGCAACATGCTGATGAACCCCTTAGCCAAGTGGTGAGTTATTCCTCTGGACAAGGTGTCATGTCTTTTCGTGAAGACATTTTAAGTATTGAAAGGATGACATTTTTAGATGTTATAGACTGCTCTCGGGAATGTTTTGTTGCTGTTTTGGCTACAATAATTGAGATTGATTATCATAATGGATGGTTTTACGAAGCATTTAGAAAATGTAAGAAGAAAGTTACATCTGTTGGGAAAAAATACTCTTGCCAGAAATGTGAGGGGATGATTACAAAGATTGATTGTTTTAAGCTGCAGGTTTATGTCATTGATTCAACCGGATCAGCTCAATTCACTTTATTTAATCAACCAATTTCTAATTTGATGGGGAAGTCTGCTTCTGAGCTCATTAATCCAACAACCAAGGATAAAGAATTTTTGTTTAAAGTCTCTGTAAGTGAATACAACATTGAGCAGAGTTGGCAAGGTTATCCTGTTAGCAATATGACTGATGATGCAGAGTTAATTGAAGAGTTTAAGAATTTGCATTCTGTTAAGGGTAATAATAAAGAAGATGGATTAGAGATGAGGGCTGATTTTATGACAGAAGTAGATGATAATATGAAAAATCATCTGTCCCAACAGCAGGATGCAAATTCTGTGCAAATATTGGTTGAGAAAGTTGATGGATCTCCTTCAAGCAAGACCCCTAATGAAACAATTTCAAAAACTCCTTCAATCAAGATCCCCAAGAAAAGGATGGTTGAAAGTGTTGATATCACTGAGGACAACATTGATCTTGGAACTCAAACATCAAGCACTAAGCTTCCAAAGTTGGCAACTATCAAGAAGGAACCAGATAATTGA 1014 0.354 MNQYLIEQGDKGPAIVILQLCKLKVFKGTKGISNAFNETKLLINPNFKEDLQYKEKLQHADEPLSQVVSYSSGQGVMSFREDILSIERMTFLDVIDCSRECFVAVLATIIEIDYHNGWFYEAFRKCKKKVTSVGKKYSCQKCEGMITKIDCFKLQVYVIDSTGSAQFTLFNQPISNLMGKSASELINPTTKDKEFLFKVSVSEYNIEQSWQGYPVSNMTDDAELIEEFKNLHSVKGNNKEDGLEMRADFMTEVDDNMKNHLSQQQDANSVQILVEKVDGSPSSKTPNETISKTPSIKIPKKRMVESVDITEDNIDLGTQTSSTKLPKLATIKKEPDN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi153g00052 337 MobiDBLite consensus disorder prediction 310 337 - -
Sebi153g00052 337 SUPERFAMILY Nucleic acid-binding proteins 88 214 IPR012340 -
Sebi153g00052 337 Gene3D - 1 65 IPR012340 -
Sebi153g00052 337 MobiDBLite consensus disorder prediction 312 327 - -
Sebi153g00052 337 CDD RPA1_DBD_C 102 206 IPR047192 -
Sebi153g00052 337 Gene3D - 68 232 IPR012340 -
Sebi153g00052 337 Pfam Replication factor-A C terminal domain 102 199 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi153g00052 Sebi-Chr153 1407372 1409502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi153g00052 1 208 Core DNA Replication Machinery Family AT5G08020 25.000 5.24e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi153g00052 - - vvo:131640044 197.208