Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi153g00041 ATGGGTTCAAGGGAATTCGCGATCCTTGCTCAAGAAACTGAGCCCCTTCTAGAAGGTTCCGACCAGATCCTCGCCATCGTTGACGTCCTCCTCGCCTCCGAGAAGCGCGTGAACAACCACCCTGACTGGTACCGCCGTCTCGCCCTCCTTCTCCACCCTGACAAGTCCCGCTTTCACTTCGCCGACCACGCTTTCAAGCTCGTCGCCGATGCTTGGGCCATCCTCTCTGACCCAATCAAAAAATCCCATTACGACAAAGACCTCTCTTTCTTTTCCGTGTCGATTATCCGTCCCTGGTTGGGTCCAGCAGGATAA 315 0.5524 MGSREFAILAQETEPLLEGSDQILAIVDVLLASEKRVNNHPDWYRRLALLLHPDKSRFHFADHAFKLVADAWAILSDPIKKSHYDKDLSFFSVSIIRPWLGPAG 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi153g00041 104 SUPERFAMILY Chaperone J-domain 43 88 IPR036869 -
Sebi153g00041 104 Pfam DnaJ domain 44 85 IPR001623 -
Sebi153g00041 104 CDD DnaJ 44 77 IPR001623 -
Sebi153g00041 104 ProSitePatterns Nt-dnaJ domain signature. 65 84 IPR018253 -
Sebi153g00041 104 Gene3D DnaJ domain 22 89 IPR036869 -
Sebi153g00041 104 PRINTS DnaJ domain signature 44 59 IPR001623 -
Sebi153g00041 104 PRINTS DnaJ domain signature 60 80 IPR001623 -
Sebi153g00041 104 ProSiteProfiles dnaJ domain profile. 19 88 IPR001623 -
Sebi153g00041 104 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 44 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi153g00041 Sebi-Chr153 1094276 1094649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi153g00041 2 95 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 55.085 8.67e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi153g00041 - - cam:101502408 167.933