Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi152g00038 ATGGAGCATGTTTTGGAAAAAAGATTTCCTCTCAGTGCAAAAGATTACAAGTTGTATGAAGAAGTTGGTGAAGGAGTAAGTGCCTCAGTATACAGGGCTCTCTGCATTCCACTCAATGAGATAGTTGCCATCAAGGTTCTTGATCTCGAGAAGTGCAATAATGATTTGGATGGCATTCGGAGAGAGGTACAGACCATGAACTTGATAGATCATCCTAATGTTTTACGGGCACATTGCTCTTTTACTACTGGGCATAATCTTTGGGTTGTGATGCCATACATGGCTGGGGGATCTTGCCTTCATATAATGAAATCTGCCTTTCCTGAGGGTTTTGAAGAGCCTGTTATTGCAACCTTATTACGTGAGGTTCTCAAAGCTCTTGTCTATCTTCATGCCCATGGACATATACACAGGGATGTTAAGGCGGGGAATATTTTGCTTGATTCTAATGGTGCAGTCAAACTGGCTGACTTTGGAGTATCAGCATGTATGTTTGATACTGGAGATAGGCAACGTTCAAGAAATACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCCCTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCGATGAAAGTTTTGCTTATGACTTTGCAAAATGCTCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCGTTCAAAGATTTGGTTGCCACCTGCTTAGTGAAAGACCCAAAGAAGCGTCCAAGTTCAGAAAAGCTTTTAAAGCACCACTTCTTTAAACAAGCACGTGCCAGTGAATATCTAGCTCGCACCATTCTCGATGGCCTTGCTCCATTAGGAGATCGTTTTAGAAACCTGAAGGCTAAAGAAGCAGATTTATTGATGCAGAACAAGGCTCTTTATGAGGATAAGGAGCAATTATCTCAGAAAGAATATATTCGTGGAATCAGTGCCTGGAATTTTAACCTCGAAGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGCTGACATGCCAAATGCAGAAGAGCCAGATATGGATAAGAAGCAAAAAGACAAATCTGATGACTCCAGGGTTCCTGCAGAGGGCCTATCTCCTGTAGCAGCCAATCATTCAGATGGTGCACCTACACTGGACAAGGAGGATGAATTCAACAATCTTAAGGATTTGGAGAGTTCACTTGCTTCATTTCCTAGTAAACCTCTTCAAGCACTTAAAGGTTGTTTTGATGTCTGTGAGGACGATGTCAATAATACTAGTCCGAGAGATTTGGATCATGATTATGGAAGAATTGACAATGAAAGCTCTGGGCCAAGTAGTTCCTTGCCACAAAATGCTATAAGTCCACATAAAAAGTTTTTAAGTGGTTCTTTGCAACCTGATAGTTTTGTTTTTCCCAAAAAGGTTGTTACCGATGGGGACAGGGATTATCTACAAACAAAATATTCTTCTGAGAGGAGTCACAGTGGTCCATTGTTATATCGGCAGAAGAGAGATACCAACAACCTTCAATTGGTTGATGATTCAGAAGGAGCCATTGTCCAGCGTCGGGGGCGATTTAAGGTCACATCGGCAGATCCCAATCCAATGGGTCCTCCAAACTGCACTTCTGGCCCAGTTGGTGGAGGTCCTAGCAGTCCCCCAAATCAGAATTTCATGGCAGCTGCTATTCTTCCATCACTGCAGTGCATCTTGCAACAGAACGGTTTGCAGAGGGAAGAAATTATTAAATTAATAAAGTATGTGGAGCAATCTTGTGGCAAGAGTACAGAATCACCGGAGGCAGGTGCAGGTGATCTTTTACAGGTTCCACCTGCGACAACTAGGGAGAGAGAGTTGCATTTTCAGGTGATTCAACTCCAACAGAGCATTGGGAGCCTTGTTGAGGAATTGCAGAGACAAAAGATGAAAAATGTTCAGGACAATTCCAAATCCATTAACTCATTGTCTTTGTCAGCTAGTGGTTGGGTTAGGTTGAATTAG 2037 0.4192 MEHVLEKRFPLSAKDYKLYEEVGEGVSASVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMNLIDHPNVLRAHCSFTTGHNLWVVMPYMAGGSCLHIMKSAFPEGFEEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKDLVATCLVKDPKKRPSSEKLLKHHFFKQARASEYLARTILDGLAPLGDRFRNLKAKEADLLMQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDADMPNAEEPDMDKKQKDKSDDSRVPAEGLSPVAANHSDGAPTLDKEDEFNNLKDLESSLASFPSKPLQALKGCFDVCEDDVNNTSPRDLDHDYGRIDNESSGPSSSLPQNAISPHKKFLSGSLQPDSFVFPKKVVTDGDRDYLQTKYSSERSHSGPLLYRQKRDTNNLQLVDDSEGAIVQRRGRFKVTSADPNPMGPPNCTSGPVGGGPSSPPNQNFMAAAILPSLQCILQQNGLQREEIIKLIKYVEQSCGKSTESPEAGAGDLLQVPPATTRERELHFQVIQLQQSIGSLVEELQRQKMKNVQDNSKSINSLSLSASGWVRLN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi152g00038 678 MobiDBLite consensus disorder prediction 437 471 - -
Sebi152g00038 678 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Sebi152g00038 678 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 653 IPR047173 GO:0043539
Sebi152g00038 678 Gene3D Transferase(Phosphotransferase) domain 1 97 327 - -
Sebi152g00038 678 MobiDBLite consensus disorder prediction 359 377 - -
Sebi152g00038 678 SUPERFAMILY Protein kinase-like (PK-like) 14 301 IPR011009 -
Sebi152g00038 678 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Sebi152g00038 678 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Sebi152g00038 678 MobiDBLite consensus disorder prediction 534 566 - -
Sebi152g00038 678 MobiDBLite consensus disorder prediction 451 470 - -
Sebi152g00038 678 MobiDBLite consensus disorder prediction 501 521 - -
Sebi152g00038 678 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi152g00038 678 MobiDBLite consensus disorder prediction 356 399 - -
Sebi152g00038 678 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi152g00038 678 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Sebi152g00038 678 MobiDBLite consensus disorder prediction 499 521 - -
Sebi152g00038 678 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi152g00038 678 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi152g00038 Sebi-Chr152 911857 930263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi152g00038 1 658 MAP Kinase Kinase Kinase Kinase AT5G14720 68.639 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Sebi152g00038 Pkinase 5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi152g00038 K08835 - gmx:100778837 1142.87