Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi152g00036 ATGGGTGTGTCTGTGATCCCTAGGGAAACTAGAGGACTAGTTGGGTTTTATAGAGATGTCCATTCCCAAATTGGGCAGAAAGGGTACTCAAGGGTTGTCTACTGTAATGATCCTGATAACCCAGATGCAATTCAGTTGAATTATAGAGGCAACTATGTTTCAACGACCAAGTATACAGCTTTTAATTTTATCCCCAAGTCTTTGTTTGAGCAGTTCAGAAGGGTTGCAAATATCTACTTTCTTATTGTGGCTTGTGTTTCATTTAGTCCACTGGCACCTTTTACAGCTCTAAGTATTGTTGCACCTTTGCTGGTTGTGATTGGAGCTACTATGGTCAAGGAAGCCGTGGAAGATTGGAGAAGGAGAAAGCAGGATATAGAGGCAAACAACCGAAAGGTTCAGGTATATGGCAGAAACTATACATTTGTGGAGACTAGATGGAAGAAACTCCGTGTTGGTGATATCATTAAAGTAAATAAGGATGAATACTTTCCTGCTGATCTTCTTCTGCTTTCCTCAAGCTATGAGGATGGGGTTTGCTATGTTGAGACAATGAATCTTGATGGAGAAACCAATCTAAAGTTAAAGCATGCCTTGGAAGTGACAACTCATCTTCAAAATGAAAAATCTCTCCAAAAGTTTAGGGCTATGGTCAAATGTGAGGATCCTAATGAAAATCTATACTCATTCATTGGAACTTTACAGTACGAGGGGGGAATTCCATATGGTCGTGGTATGACAGAAGTGGAGAAAGCACTTGCTAGGAGAGGGAAAATGTGGAATCTGAGGTGGATGGTTTTATCATCTGATTTCTTGGGCCAGAATAGTGATGCTGTGGACTCTAAAAGACCAATTAAGGGCTTTAACTTTAGAGATGAACGCATAATGAGTGGGCAATGGGTTAATGAACCACAACCAGACATCATACAGAAATTCTTTCGAGTTTTAGCTATTTGTCATACAGCTATTCCAGAAGAACATAAAGATTCAGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCATTTGTCATAGCTGCAAAGGAGCTTGGTTTTGAGTTTTTCGCAAGGACACAAACAAGCATATCATTGCATGAATTAAATTATGGAAGTGGAAAAAAGGTTGACAGGTTTGAATCTGTTGATACTTTCATCCATAATCTGGCATACCATATAAGTGTACCAGCTTTTGCATGTGTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGGTTCCTGAATGTTATTGAAAAGCTTGCCCAGGCAGGAATCAAGTTATGGGTATTGACTGGGGACAAGATGGAAACTGCAGTCAACATAGGGTATGCTTGTAGTTTACTTAGACAAGACATGAAAAAGATAGTGATCACTCTTGATTCACCAGATATCCTATCCTTGGAAAAACAAGGGGACAAGGAGGCTCTAGCCAAGTTGGTGCTTGAGGTGTTAAAACATTATAATCACATCAACCAAATATGCAGGTTTACTAAATTGGTGAAACTGGGAACAGGGAAGACAACATTATCTATTGGTGATGGCGCAAATGATGTTGGAATGCTTCAGGAGGCTGATATTGGAGTTGGAATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCAATTGCTCAATTCCGTTTTCTGGAGCGATTGTTGTTGGTACATGGCCACTGGTGTTATAGGCGAATATCAATGATGATATGCTATTTTTTCTATAAAAACATTGCATTTGGCTTTACCCTATTTTGGTTTGAGGCATATGCTTCTTTCTCTGGACAAGCTGCATACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCAGTAATCGCCCTAGGTGTTTTTGATCAGGATGTTTCTGCCAGACTTTGTCTAAAGGGAGTAGAGGGCACCCTCTTCAGCTGGCCCCGGATTCTTGGCTGGATGTTGAATGGAGTCCTCAGTTCTTTAGCCATCTTCTTCTTGACCACAAATTCTGTCTTAAGCCAGGCCTTCAGAAGAGATGGTCAGATGGTTGATTTTGAAATACTTGGGGTCACAATGTATACTTGTGTGGTGTGGACTGTGAATTGCCAAATGGCACTGTCCATTAACTACTTCACTTGGATCCAGCACTTTTTCATATGGGGCAGCATTGCCTTCTGGTATGTATTTGTGCTGATTTATGGTTATCTCTCTCCAGCCATATCCACAACAGCTTACATGGTTTTTGTTGAAGCATGTGCTCCCAGTGGTCTATATTGGCTAGTTACCCTTTTGGTTGTTGTATGTGTGCTTCTACCTTATTTCTGCTATAGATCTTTCCAGAGTCGGTTTCTACCAATGTACCATGATATTATACAGAGAAAACAAGTTGAAGGGTCTGAAATAGAGATATCTGATGAGTTACCTCAACAAGTCCAAGGCAAACTAATACATCTCAGAGAGAGATTGAAGCAACGGGAACCGTGA 2478 0.406 MGVSVIPRETRGLVGFYRDVHSQIGQKGYSRVVYCNDPDNPDAIQLNYRGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACVSFSPLAPFTALSIVAPLLVVIGATMVKEAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVNKDEYFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEVTTHLQNEKSLQKFRAMVKCEDPNENLYSFIGTLQYEGGIPYGRGMTEVEKALARRGKMWNLRWMVLSSDFLGQNSDAVDSKRPIKGFNFRDERIMSGQWVNEPQPDIIQKFFRVLAICHTAIPEEHKDSGEISYEAESPDEAAFVIAAKELGFEFFARTQTSISLHELNYGSGKKVDRFESVDTFIHNLAYHISVPAFACVRVQQFPQKNVRFLNVIEKLAQAGIKLWVLTGDKMETAVNIGYACSLLRQDMKKIVITLDSPDILSLEKQGDKEALAKLVLEVLKHYNHINQICRFTKLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKGVEGTLFSWPRILGWMLNGVLSSLAIFFLTTNSVLSQAFRRDGQMVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLIYGYLSPAISTTAYMVFVEACAPSGLYWLVTLLVVVCVLLPYFCYRSFQSRFLPMYHDIIQRKQVEGSEIEISDELPQQVQGKLIHLRERLKQREP 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi152g00036 825 Coils Coil 109 129 - -
Sebi152g00036 825 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 239 370 - -
Sebi152g00036 825 Pfam Phospholipid-translocating P-type ATPase C-terminal 540 783 IPR032630 -
Sebi152g00036 825 SUPERFAMILY HAD-like 415 560 IPR036412 -
Sebi152g00036 825 PRINTS P-type cation-transporting ATPase superfamily signature 424 434 - -
Sebi152g00036 825 PRINTS P-type cation-transporting ATPase superfamily signature 512 531 - -
Sebi152g00036 825 Pfam Phospholipid-translocating ATPase N-terminal 33 96 IPR032631 -
Sebi152g00036 825 SUPERFAMILY Calcium ATPase, transduction domain A 136 204 IPR008250 -
Sebi152g00036 825 Gene3D - 105 235 - -
Sebi152g00036 825 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 782 IPR023298 -
Sebi152g00036 825 Gene3D - 276 386 IPR023299 GO:0000166
Sebi152g00036 825 Gene3D - 398 554 IPR023214 -
Sebi152g00036 825 NCBIfam HAD-IC family P-type ATPase 505 595 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi152g00036 Sebi-Chr152 793926 802325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi152g00036 416 824 Primary Pumps ATPases AT3G27870 63.180 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi152g00036 K01530 - gmx:100779714 684.1