Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi152g00035 ATGGCTGTGAAACCTACCAAGGCAGAGAAGAAGGTCGCTTACGATGCTAAGCTGTGCCAGCTCCTCGAGGAGTACACCCAGATCTTAGTGGTGAATGCCGACAATGTCGGATCCAACCAGCTCCAGAACATTCGTAAGGGTCTTCGTGGTGATTCCATTGTCCTCATGGGAAAGAACACCATGATGAAGCGTTCTGTTCGGATGCATGCTGAGAATACGGGCAACAACGTCTTTCTCAGCCTTATCCCCCTCCTTGTCGGTAATGTGGGTTTGATTTTCACAAAAGGTGACTTGAAAGAGGTTAGCGAGGAGGTTGCTAAGTACAAGGTCGGAGCTCCTGCTCGTGTGGGTTTGGTTGCTCCAATTGATGTCGTTGTTCCTCCTGGCAACACAGGGCTCGACCCCTCTCAGACCTCTTTCTTCCAGGTGCTCAACATTCCAACCAAGATTAACAAGGGTACTGTGGAAATTATTACCCCTGTGGAACTCATTAAGAAGGGAGACAAGGTTGGCTCCTCAGAAGCTGCATTGCTTGCCAAGCTAGGCATAAGGCCCTTCTCATATGGACTTGTGGTCCTTTCTGTTTATGATAATGGTTCAGTGTTTAGCCCTGAGGTTCTTGATCTTACTGAGGATGACCTCATTGAGAAGTTTGCTATTGGTGTCTCAATGGTTACTTCTCTTTCATTGGCCATCTCATACCCAACACTCGCAGCTGCACCACATATGTTTGTCAATGGTTATAAGAACGTTCTTGCTGTTGCTGTTGAGACAGAGTATTCTTTCCCACAGGCAGACAAGGTCAAGGAGTACCTCAAGATTGCCAATAATTATCATCAGACCACCTTGTCAAGTCCCAACTATTCCACAGCGTGCCGGTTTTTAAAGCTTAACTGCAAATACACGATTTGCCCATGCCAGGACAGTGGTCCTTTTATGTTGTTTTGA 948 0.4684 MAVKPTKAEKKVAYDAKLCQLLEEYTQILVVNADNVGSNQLQNIRKGLRGDSIVLMGKNTMMKRSVRMHAENTGNNVFLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAIGVSMVTSLSLAISYPTLAAAPHMFVNGYKNVLAVAVETEYSFPQADKVKEYLKIANNYHQTTLSSPNYSTACRFLKLNCKYTICPCQDSGPFMLF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi152g00035 315 PIRSF L10E 1 292 IPR030670 GO:0042254
Sebi152g00035 315 CDD Ribosomal_P0_L10e 9 185 - -
Sebi152g00035 315 FunFam 60S acidic ribosomal protein P0 113 186 - -
Sebi152g00035 315 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Sebi152g00035 315 Gene3D - 6 209 IPR043141 -
Sebi152g00035 315 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 278 - -
Sebi152g00035 315 Pfam Ribosomal protein L10 7 108 IPR001790 -
Sebi152g00035 315 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Sebi152g00035 315 Gene3D - 114 185 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi152g00035 Sebi-Chr152 786604 789058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi152g00035 1 273 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 88.278 1.68e-177 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi152g00035 K02941 - qsa:O6P43_008964 507.294