Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi152g00021 ATGGTTGGTGGTGGTAGTGATGGCTCACTTGATCTCTGTGCTAGAGTCTGCATAATTGATGATCATGAAAACATCATTTTCCATTCCTATGTGAACCCACCAATTCCAGTCACAAACTACAGGTTTGGGATGACAGGTATCCGACCAGAATACTTGAGGGATGCAATGCCAATGAGGCAAGTGCAAAGGAGGATTCAAGACTTCCTATGCAATGGAGAATCTTTGTGGAAAATTCAACCAACAGGAGGAAATGCCAAAATTCTTGTGGGTCATGGTTTAGATCATGACCTAGAATCCTTGCAAATAGAATATAAAGCTGAAAAAATCAGGGACACAGCAAAATACCCTCCACTGATGAAATCGAGCAAGTTGAGCAACTCACTCAAGTATGACATTCAAATGGGGATACAGGATCCATATGATGATTGTGTAGCAACAATGAGGCTGTACAAGAGAATGAGATGTCAAGGACACAAAATAGAGGAATACCCATTGGCATCTGACCCACAAAACAGGAATAATTTTGGTTCATGGAGGCAAAGTGAGCTTGAGAAAATGAGCCCCCAACAAATGCTGGAAATCTCAAGGTCAGACTACAATTGCTGGTGCTTGGATTCCTTATATATATAA 630 0.4111 MVGGGSDGSLDLCARVCIIDDHENIIFHSYVNPPIPVTNYRFGMTGIRPEYLRDAMPMRQVQRRIQDFLCNGESLWKIQPTGGNAKILVGHGLDHDLESLQIEYKAEKIRDTAKYPPLMKSSKLSNSLKYDIQMGIQDPYDDCVATMRLYKRMRCQGHKIEEYPLASDPQNRNNFGSWRQSELEKMSPQQMLEISRSDYNCWCLDSLYI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi152g00021 209 Pfam Exonuclease 14 120 IPR013520 -
Sebi152g00021 209 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 204 IPR047021 GO:0004527
Sebi152g00021 209 Gene3D - 1 166 IPR036397 GO:0003676
Sebi152g00021 209 SMART exoiiiendus 1 159 IPR013520 -
Sebi152g00021 209 SUPERFAMILY Ribonuclease H-like 8 151 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi152g00021 Sebi-Chr152 481852 483251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi152g00021 1 207 C2H2 Transcription Factor Family AT3G27970 71.628 2.04e-115 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi152g00021 - - aprc:113862359 360.533