Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi152g00019 ATGGCATCTCACATAAAAGCTTGGGTATACTCTGAATATGGAAATATAGAAGAGATTCTGAAATTTGATCCTAATGTACCTATACCAGACATCAAGGAAGACCAAGTGCTCATCAAGGTTGTGGCTGCAGCACTTAACCCTGTTGATTATAAGAGGGCTCTAGGCTATTTCAAGAACACTGACTCTGCTTTACCCACTGCTCCAGGGTATGATGTTGCTGGTGTGGTGGTCAGAGTGGGAAGTCAAGTGAGGAAATTTAAGGTTGGGGATGAAGTTTATGGTGATATCAATGAGAATGCTTTGAACCATCCAAAGGCCATTGGGTCTTTGGCAGAGTATACTGCTGCTGAAGAAAAAGTACTTGCTCACAAACCCTCCAATTTGAGTTTTATTGAAGCTGCTAGCCTTCCTTTAGCCATCATTACTGCATATCAAGGACTTGAAAGAGTTGAGTTTTCTGCTGGAAAATCTATACTTGTTCTGGGAGGTGCTGGAGGAGTTGGAACCCTTGTTATTCAGCTCGCCAAGCATGTATTTGGCGCATCTAAGGTTGCAGCTACTGCTAGTACTGCCAAACTGGAATTGTTGAGAAACTTGGGAGCAGACTTGCCTATTGATTATACAAAGGAGAATTTTGAAGAACTGCGAGAAAAGTTTGATGTGGTGTATGATGCAGTAGGAGGGCAGAGTGACAGGGCTTTGAAGGCTATTAAAGAAGGGGGCAAGGTTGTGACAATATTGACACCTGAAACTCCACCAGCTGTATTCTTCTTACTCACTTCAGATGGGGCTGTGCTGGAGAAATTACAACCTTACTTGGAGAGTGGTAAGGTGAAGCCAATACTTGACCCCAACAGCCCCTTTCCATTTTCTCAGGCCGTGGAAGCATTTGCCTACTTGAAGACTAATAGAGCCATTGGGAAGGTTGTTATACATCCCATCCCATAA 948 0.4346 MASHIKAWVYSEYGNIEEILKFDPNVPIPDIKEDQVLIKVVAAALNPVDYKRALGYFKNTDSALPTAPGYDVAGVVVRVGSQVRKFKVGDEVYGDINENALNHPKAIGSLAEYTAAEEKVLAHKPSNLSFIEAASLPLAIITAYQGLERVEFSAGKSILVLGGAGGVGTLVIQLAKHVFGASKVAATASTAKLELLRNLGADLPIDYTKENFEELREKFDVVYDAVGGQSDRALKAIKEGGKVVTILTPETPPAVFFLLTSDGAVLEKLQPYLESGKVKPILDPNSPFPFSQAVEAFAYLKTNRAIGKVVIHPIP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi152g00019 315 Gene3D - 12 311 - -
Sebi152g00019 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 128 282 IPR036291 -
Sebi152g00019 315 CDD MDR_like_2 6 311 - -
Sebi152g00019 315 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 315 IPR044626 GO:0016628
Sebi152g00019 315 SMART PKS_ER_names_mod 14 311 IPR020843 GO:0016491
Sebi152g00019 315 Pfam Zinc-binding dehydrogenase 199 311 - -
Sebi152g00019 315 Pfam Alcohol dehydrogenase GroES-like domain 34 96 IPR013154 -
Sebi152g00019 315 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 155 176 IPR002364 GO:0008270|GO:0016491
Sebi152g00019 315 Gene3D - 147 262 - -
Sebi152g00019 315 SUPERFAMILY GroES-like 5 162 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi152g00019 Sebi-Chr152 471253 472668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi152g00019 58 249 Monolignol Biosynthesis Gene Families AT1G72680 26.126 2.91e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi152g00019 K18980 - gmx:100791274 520.005