Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi152g00017 ATGGCAAACACTTCTAGCATTCCATCTCAAACAAAAGCTTGGGTATACTCTGAATATGGGAACATAGAAGAGGTTCTCAAGTTTGATCCAAATGTACCTACACCACACATCAAGGAAGACCAGGTGCTTATCAAGGTGGTGGCTGCAGCCATTAATCCTGTTGATTATAAGAGAGCTCTTGGACATTTCAAGGACATTGACTCTCCTTTACCAACTGCGCCTGGGTATGATGTTGCTGGTGTGGTGGTCAAAGTGGGAAGCCAAGTGAAGAAATTTAAGGTTGGTGATGAAGTTTATGGTGATGTTAATGAGATTACTTTGGACCATCCAAAGACTGTTGGTTCTTTGGCTGAGTATACTGCTGCTGAAGAGAAAGTACTTGCTCACAAACCCTCCAATTTGAGTTTCATTGAAGCTGCCAGCCTCCCTTTAGCCATCATCACTGCATATCAAGGACTTGAAAGAATTGAGTTTTCTGCTGGAAAATCTATACTTGTTCTGGGAGGTGCTGGAGGAGTTGGAACCCTTGTTATTCAGATCGCCAAGCACGTGTTTGGTGCGTCTAAGATAGCAGCTACTTCAAGTACTGGAAAATTGGAATTTTTAGGAGCAGACTTGCCTATTGATTATACAAAGGAAAATTTTGAAGAACTCTCAGAAAAGTTTGATGTTGTCTACGATGCAGTAGGGCAGAGTGACAGGGCATTGAAGGCTGTTAAAGAAGGTGGCAAAGTTGTGACAATATTGCCACCTGGAACTCCACCAGCTATCCCCTTCTTACTCACTTCAGATGGTGCTGTGTTGGAGAAATTACAGCCTTACTTGGAGAGTGGTAAGGTGAAGCCAATACTTGACCCCAATAGCCCCTTTCCATTTTCTCAGGCTGTGGAAGCATTTTCCTACCTCAACACTAATAGAGCCACTGGGAAAGTAGTCATACATCCAATCCCATGA 954 0.4319 MANTSSIPSQTKAWVYSEYGNIEEVLKFDPNVPTPHIKEDQVLIKVVAAAINPVDYKRALGHFKDIDSPLPTAPGYDVAGVVVKVGSQVKKFKVGDEVYGDVNEITLDHPKTVGSLAEYTAAEEKVLAHKPSNLSFIEAASLPLAIITAYQGLERIEFSAGKSILVLGGAGGVGTLVIQIAKHVFGASKIAATSSTGKLEFLGADLPIDYTKENFEELSEKFDVVYDAVGQSDRALKAVKEGGKVVTILPPGTPPAIPFLLTSDGAVLEKLQPYLESGKVKPILDPNSPFPFSQAVEAFSYLNTNRATGKVVIHPIP 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi152g00017 317 CDD MDR_like_2 12 313 - -
Sebi152g00017 317 Gene3D - 153 264 - -
Sebi152g00017 317 SMART PKS_ER_names_mod 20 313 IPR020843 GO:0016491
Sebi152g00017 317 Gene3D - 18 313 - -
Sebi152g00017 317 Pfam Zinc-binding dehydrogenase 202 313 - -
Sebi152g00017 317 SUPERFAMILY GroES-like 8 168 IPR011032 -
Sebi152g00017 317 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 317 IPR044626 GO:0016628
Sebi152g00017 317 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 257 IPR036291 -
Sebi152g00017 317 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Sebi152g00017 317 Pfam Alcohol dehydrogenase GroES-like domain 40 101 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi152g00017 Sebi-Chr152 449368 450699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi152g00017 40 254 Monolignol Biosynthesis Gene Families AT3G19450 25.984 6.64e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi152g00017 K18980 - gmx:100791274 516.538