Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi152g00016 ATGGCAAACACTCCAAATATTCCTTCTCTTACTAAAGCTTGGGTATACTCTGAATATGGGAACATAGAAGAGGTTCTCAAGTTTGATCCAAATGTACCTACACCACACATCAAGGAAGACCAGGTGCTTATCAAGGTGGTGGCTGCAGCCATTAATCCTGTTGATTATAAGAGAGCTCTTGGACATTTCAAGGACATTGACTCTCCTTTACCCACTGCACCAGGGTACGATGTTGCTGGTGTGGTGGTCAAAGTGGGAAGCCAAGTGAAGAAATTTAAGGTTGGTGATGAAGTTTATGGTGATGTTAATGAGATTACTTTGGACCATCCAAAGACTGTTGGTTCTTTGGCAGAGTATACTGCTGCTGAAGAAAGAGTACTTGCTCACAAACCCTCCAATTTGAGCTTTATTGAAGCTGCTAGCCTCCCTTTAGCCATCATCACTGCTTATCAAGGACTTGAAAGTGTTGAGTTTTCTGCTGGTAAATCTATACTTGTTCTGGGAGGTGCTGGAGGAGTTGGAACACTTGTTATTCAGCTCGCCAAACATGTATTTGGCGCATCTAAGGTTGCAGCTACTGCTAGTACTGCCAAACTGGAATTGTTGAGAAACTTGGGAGCAGACTTGCCTATTGATTATACAAAGGAGAATTTTGAAGAACTGCCAGAAAAGTTTGATGTGGTGTATGATGCAGTAGGGCAGAGTGACAGAGCATGGAAGGCTGTTAAAGAAGGGGGCAAGGTTGTGACAATAGTACCATCTGGAACTCCACCAGATATATTCTTCTTACTCACTTCAGATGGGGCTGTGTTGGAGAAACTACAACCTTACTTGGAGAGTGGCAAGGTGAAGCCAATACTTGATCCCAAAAGCCCCTTTCCATTTTCTCAGACTGTGGAAGCATTTTCCTACCTCAAGACTAATAAAGCTACTGGGAAAGTAGTCATACATCCCATCCCATAA 963 0.4309 MANTPNIPSLTKAWVYSEYGNIEEVLKFDPNVPTPHIKEDQVLIKVVAAAINPVDYKRALGHFKDIDSPLPTAPGYDVAGVVVKVGSQVKKFKVGDEVYGDVNEITLDHPKTVGSLAEYTAAEERVLAHKPSNLSFIEAASLPLAIITAYQGLESVEFSAGKSILVLGGAGGVGTLVIQLAKHVFGASKVAATASTAKLELLRNLGADLPIDYTKENFEELPEKFDVVYDAVGQSDRAWKAVKEGGKVVTIVPSGTPPDIFFLLTSDGAVLEKLQPYLESGKVKPILDPKSPFPFSQTVEAFSYLKTNKATGKVVIHPIP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi152g00016 320 Pfam Zinc-binding dehydrogenase 205 316 - -
Sebi152g00016 320 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Sebi152g00016 320 Gene3D - 153 267 - -
Sebi152g00016 320 SMART PKS_ER_names_mod 20 316 IPR020843 GO:0016491
Sebi152g00016 320 Pfam Alcohol dehydrogenase GroES-like domain 40 101 IPR013154 -
Sebi152g00016 320 CDD MDR_like_2 12 316 - -
Sebi152g00016 320 Gene3D - 18 316 - -
Sebi152g00016 320 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 320 IPR044626 GO:0016628
Sebi152g00016 320 SUPERFAMILY GroES-like 8 166 IPR011032 -
Sebi152g00016 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 260 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi152g00016 Sebi-Chr152 387001 444093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi152g00016 67 230 Monolignol Biosynthesis Gene Families AT1G72680 29.016 5.80e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi152g00016 K18980 - gmx:100791274 510.375