Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi152g00010 ATGGATAAAGATAAAGATCCAGTGTTTGACTGTAGTACTGATGATAGTCTTAGTAGTGGAGAGGTTGTTGAGCTGTCTAAGAAGAATGAAAAACATGAGACTGATGTAGGTGATGGTGAATGTAAAAGGATGTTTGAGTTGTCAGTATATGAAATGTTGTCCAAAGAGTTTGCTAGTGAAGAAGAGGCATATGAATTTTATAAGTTCTATGCGAGACATCATGGTTTTGTGGTTAGGAAAGATGATGTAACCAAGGATCTTAGGGGTAATCATATAATGCGACAATTTGTTTGCAATAGGGAGGGTTTAAGGAACAAAAAGCACTTTATGAGGGTGGATAGGAAGAGAGAGCATAGACCATTGACTCGTACAAATTGCCTTGCTAAGCTTCGTGTACACTACCATCACAAGAGTTTAAAGTGGACGGTAGTGTCATTTGAGCAGTGTCATAACCATGAGCTTGCCCCATCTAGATTTACACACCTACACCCTGCTTATCGTGGTATGTCCGCTACGGATAAGGCGCAGGTTGATAGTTTGCATGCATATGGGGTACCTAGTGGCTCAAAAAGGGGGATATGGTCGGGTTGGCTTTTCAAAGAAGGACATGTATAA 615 0.4065 MDKDKDPVFDCSTDDSLSSGEVVELSKKNEKHETDVGDGECKRMFELSVYEMLSKEFASEEEAYEFYKFYARHHGFVVRKDDVTKDLRGNHIMRQFVCNREGLRNKKHFMRVDRKREHRPLTRTNCLAKLRVHYHHKSLKWTVVSFEQCHNHELAPSRFTHLHPAYRGMSATDKAQVDSLHAYGVPSGSKRGIWSGWLFKEGHV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi152g00010 204 Pfam FAR1 DNA-binding domain 65 156 IPR004330 -
Sebi152g00010 204 MobiDBLite consensus disorder prediction 1 34 - -
Sebi152g00010 204 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi152g00010 Sebi-Chr152 251806 252420 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi152g00010 FAR1 1.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi152g00010 - - ccaj:109792835 188.734