Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi151g00085 ATGGCACCAAATCCAAAAGTAGTAGCGGCCTATCGTGCAATGGCAAATCTTGGAATTCATGAATCAAAAGTGAAACCAGTATTAAGGAAACTACTTAAATTGTATGATAAAAATTGGGAACTTATTGAAGAAGAGAATTATAGGGCTCTTGCAGATGCTATATTTGAGGAGGATGAAAACAAGGTGCCGGAGCCAGACCAGAAAATTAAAAGAAAGCAGGGAGGAGAGACAGATGATGAAGAAGCTCATATGCATGATGAGCCATTGCGACCTTTGAAGATGTTGCGTTTAAGAAGCCAAGAGGTTCAATCTTCACGCCTCCTGACTAGTTGTGGCCCCAGCTCTGCTGCCTTTCCATTAAAAACACCTAAATTAGAAGATGGCACAATGCCTCAAAGTAATTCCAGACTGCAGCCTCAAAACACAACAGTGTTACCTGATGGAAATGCAAGGATTGAAGCGCATCAAGTTCCACCACGAGATGTCATTGTTGACAAGGGAAAGCAACCTGTATCACCCCAAGATACTCCCAGAGGGAGAAGATCTATATATGACAGAACTACTCCTGCAGTTCCATTTAAAGAACCAACAGTCGAACCAGGAGCCTCCCTGTCATCAAAAAACAAAATGCCTCATTCTTACACTTTTATCATGCCTAAGGATGAGCCTGTTGATGATATATTAGATAATGAAGTTCCCCTTGCAGTGATTCATCCTGAACCATCAAGTGGAAGAGACTATTCAATGAAAAATGATTCAGCTGGTCTGCAAGATGGCCATGACACTGTGGCATCACAAGGCAGAGGTGAAGACGGTGAAGGTGAAGATATTCTTCCTTCCTCAAATGAAGAAGTAGCTTCTAATGTAGAGCTAACCCCATCTTCTATGGGAGAGGAAGGACCTGAGGAGATAACACCGACTGTTGATAGTTCAAAGGAGTTTGAGACAAATGACACACTGATTGCCAAAGGAAAAAAAGATTTCATGCGATCCTGCGTTTCAAATGGATCAATCAATATTATGTCTTCTCCTACCCTGGTTGTACCTCAAGTTCATGATTCTTCACCCGGCTGGAGTGGTCTGGATGGTACTGCACAAGGTTCTGAGAAGGCTGGGATGAATGATTTCTTGGAAAGTGATGGCAGGAATGAGCTAGAGAGACCTTCAGTGAATGCTCCAAAGCATCAGCCTACAACTGGTGATATAAGGGATATTCGTGATGTTAATGACATAACAAAGGGAGAAGAAAGGGTGAAAGTTTCATGGGTGAATAACAGTACTAATGATTCCCCAACATCCTTTCACTACATACCACGAAACCTTGTGTTCAAAGATGCATATGTTAATTTTTCACTATCTCAAATCAGGAATGAGGATTGTTGTTCTACCTGTATGGGCAATTGTGTCTTGTCATCTAAACCATGTTCGTGCTCAAATAAAACTGGGGGTGAATTTGCTTACACTGCACAAGGCCTGCTAAAGGAAGAGTTCTTGGATGAGTGTATTGCCATCATCCGGGACCCTCAAAATTATTTTTACTGCAAAGACTGCCCGCTTGAAAGATCAAAGAGTGATGATTGTTTAGAACCATGTAAAGGACACTTGAAGAGGAAGTTTATTAAAGAGTGCTGGAGTAAATGTGGTTGTGACGGAAAAGGGTGGGGTCTTCGTACCTTAGAGGATCTTCCAAAAGGTGCATTTATTTGTGAGTTTGTTGGAGAAATTTTGACTGTCAAAGAGTTGCATGAGAGGAACTTGAAATATCCCAAAAATGGGAAATTTACATACCCAATTTTATTGGATGCCGATTGGGGTTCTAGAGCAGTGAAGGATAATGAAGCTCTTTGCTTATATGCAGCAACATTTGGAAATGCTGCTAGGTTTATTAACCACAGATGTTTAGATGCAAACTTGATTGAGATCCCAGTTGAAGTTGAGGGCCCAACTCATCACTACTATCATTTTGCCTTCTTCACGTCCAGGAAAATAGCAACACATGAAGAGCTCACTTGGGATTATGGCGTCAACTTTGATGATCATGACCAGCTAGTTGAGTTGTTCCGGTGCAGATGTGGCAGTAAATTCTGCAGGAATATGAAGCGATCAAATAGATCCATTAAATCGTCAACTTCATGA 2136 0.4139 MAPNPKVVAAYRAMANLGIHESKVKPVLRKLLKLYDKNWELIEEENYRALADAIFEEDENKVPEPDQKIKRKQGGETDDEEAHMHDEPLRPLKMLRLRSQEVQSSRLLTSCGPSSAAFPLKTPKLEDGTMPQSNSRLQPQNTTVLPDGNARIEAHQVPPRDVIVDKGKQPVSPQDTPRGRRSIYDRTTPAVPFKEPTVEPGASLSSKNKMPHSYTFIMPKDEPVDDILDNEVPLAVIHPEPSSGRDYSMKNDSAGLQDGHDTVASQGRGEDGEGEDILPSSNEEVASNVELTPSSMGEEGPEEITPTVDSSKEFETNDTLIAKGKKDFMRSCVSNGSINIMSSPTLVVPQVHDSSPGWSGLDGTAQGSEKAGMNDFLESDGRNELERPSVNAPKHQPTTGDIRDIRDVNDITKGEERVKVSWVNNSTNDSPTSFHYIPRNLVFKDAYVNFSLSQIRNEDCCSTCMGNCVLSSKPCSCSNKTGGEFAYTAQGLLKEEFLDECIAIIRDPQNYFYCKDCPLERSKSDDCLEPCKGHLKRKFIKECWSKCGCDGKGWGLRTLEDLPKGAFICEFVGEILTVKELHERNLKYPKNGKFTYPILLDADWGSRAVKDNEALCLYAATFGNAARFINHRCLDANLIEIPVEVEGPTHHYYHFAFFTSRKIATHEELTWDYGVNFDDHDQLVELFRCRCGSKFCRNMKRSNRSIKSSTS 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi151g00085 711 MobiDBLite consensus disorder prediction 58 92 - -
Sebi151g00085 711 Gene3D - 1 60 IPR043017 -
Sebi151g00085 711 ProSiteProfiles SET domain profile. 538 674 IPR001214 GO:0005515
Sebi151g00085 711 MobiDBLite consensus disorder prediction 375 389 - -
Sebi151g00085 711 Pfam SET domain 553 674 IPR001214 GO:0005515
Sebi151g00085 711 MobiDBLite consensus disorder prediction 105 210 - -
Sebi151g00085 711 MobiDBLite consensus disorder prediction 127 147 - -
Sebi151g00085 711 Pfam Pre-SET motif 411 550 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi151g00085 711 MobiDBLite consensus disorder prediction 237 315 - -
Sebi151g00085 711 SUPERFAMILY SET domain 419 697 IPR046341 -
Sebi151g00085 711 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 708 - -
Sebi151g00085 711 SMART preset_2 408 548 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi151g00085 711 SMART set_7 540 680 IPR001214 GO:0005515
Sebi151g00085 711 Gene3D SET domain 411 699 IPR046341 -
Sebi151g00085 711 MobiDBLite consensus disorder prediction 357 402 - -
Sebi151g00085 711 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi151g00085 Sebi-Chr151 1396277 1401952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi151g00085 410 697 Su(var)3-9 homologs AT1G73100 29.180 1.28e-23 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi151g00085 Pre-SET 2.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi151g00085 - - gmx:100809678 1009.59