Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi151g00084 ATGGCACCAAATCCAAAAGTATTAGCGGCCTATCGTGCAATGGCAAATCTTGGAGTTCATGAATCAAAAGTGAAACCAGTGTTAAAGAAACTACTTAAATTGTATGATAAAAATTGGGAACTTATTGAAGAAGAGAATTATAGGGCTCTTGCAGATGCTATATTTGAGGAGGATGAAAACAAGGTGCCGGAGCCAGACCAGAAAATTAAAAGAAAGCAGGGAGGAGAGACAGATGATGAAGAAGCTCATATGCATGATGAGCCATTGCGACCTTTGAAGAGGTTGCGTTTAAGAAGCCGAGATGTTCAATCTTCACGCCTCCTGACTAGTTGTGGCCCCAGCTCTGCTGCCTTTCCATTGAAAACACCTAAATTAGAAGATGGCACAATGCCTCAAAGTAATTCCAGATTGCAGCCTCAAAGCACAACAGTGTTACCTGATGGAAATGCAAGGATTGAAGCGCATCAAGTTCCACCACGAGTTGTCATTGTTGACAAGGGAAAGCAACCTGTATCACCCGAAGATACTCCCAGAGGGAGAAGATCTATATCTGACAGAACTACTCGTGCAGTGCCATTTAAAGAACCAACAGTCGAACCAGAAGCCTCCCTGTCATCAAAAAACAAAATGCCTCATTCTTACACTTTTATCATGCCTAAGGATGAGCCTGTTGATGATATATTAGATAATGAAGTTCCCCTTGCAGTGATTCATCCTGAACCATCAAGTGGAAGAGACTATTCAATGAAAAATGATTCAGCTGGTCTGCAAGATGGCCATGACACTGTGGCATCACAAGGCAGAGGTGAAGATGGTGAAGGTGAAGATATTCTTCCTTCCTCAAATGAAGAAGTGGCTTCTAATGTAGAGCTAACCCCATCTTGTACGGGCAATTGTGTCTTGTCATCTAAACCATGTTCGTGCTCAAATAAAACCGGGGGTGAATTTGCTTACACTGCACAAGGCCCGCTAAAGGAAGAGTTCTTGGATGAGTGTATTGCCATCATCCGGGACCCTCAAAATTATTTTTATTGCAAAGATTGCCCGCTTGAAAGATCAAAGAGTGATGATTGTTTAGAACCATGTAAAGGACACTTGAAGAGGAAGTTTATTAAAGAGTGCTGGAGTAAATATGGTTGTGACGGAAAAGGGTGGGGTCTTCGTACCTTAGAGGATCTTCCAAAAGGTGCATTTATTTGTGAGTTTGTTGGAGAAATTTTGACTGTCAAAGAGTTGCATGAGAGGAACTTGAAATATCGCAAAAATGGGAAATTTACATACCCAATTTTATTGGATGCCGATTGGGGTTCTAGAGCAGTGAAGGATAATAAAGCTCTTTGCTTATATGCAACAACATTTGGAAATACTGCTAGGTTTATTAACCACAGATGTTTAGATGCAAACTTGATTGAGATCCCAGTTGAAGTTGAGGGCCCAACTCATCACTACTATCATGTGAGAAATTAG 1467 0.4124 MAPNPKVLAAYRAMANLGVHESKVKPVLKKLLKLYDKNWELIEEENYRALADAIFEEDENKVPEPDQKIKRKQGGETDDEEAHMHDEPLRPLKRLRLRSRDVQSSRLLTSCGPSSAAFPLKTPKLEDGTMPQSNSRLQPQSTTVLPDGNARIEAHQVPPRVVIVDKGKQPVSPEDTPRGRRSISDRTTRAVPFKEPTVEPEASLSSKNKMPHSYTFIMPKDEPVDDILDNEVPLAVIHPEPSSGRDYSMKNDSAGLQDGHDTVASQGRGEDGEGEDILPSSNEEVASNVELTPSCTGNCVLSSKPCSCSNKTGGEFAYTAQGPLKEEFLDECIAIIRDPQNYFYCKDCPLERSKSDDCLEPCKGHLKRKFIKECWSKYGCDGKGWGLRTLEDLPKGAFICEFVGEILTVKELHERNLKYRKNGKFTYPILLDADWGSRAVKDNKALCLYATTFGNTARFINHRCLDANLIEIPVEVEGPTHHYYHVRN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi151g00084 488 MobiDBLite consensus disorder prediction 171 188 - -
Sebi151g00084 488 Pfam SET domain 384 472 IPR001214 GO:0005515
Sebi151g00084 488 MobiDBLite consensus disorder prediction 238 279 - -
Sebi151g00084 488 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Sebi151g00084 488 ProSiteProfiles SET domain profile. 369 488 IPR001214 GO:0005515
Sebi151g00084 488 MobiDBLite consensus disorder prediction 105 143 - -
Sebi151g00084 488 MobiDBLite consensus disorder prediction 58 91 - -
Sebi151g00084 488 Gene3D SET domain 275 487 IPR046341 -
Sebi151g00084 488 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 291 486 - -
Sebi151g00084 488 SMART set_7 373 486 IPR001214 GO:0005515
Sebi151g00084 488 Gene3D - 1 60 IPR043017 -
Sebi151g00084 488 MobiDBLite consensus disorder prediction 167 188 - -
Sebi151g00084 488 SUPERFAMILY SET domain 289 486 IPR046341 -
Sebi151g00084 488 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi151g00084 Sebi-Chr151 1386103 1389743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi151g00084 358 486 C2H2 Transcription Factor Family AT2G23740 32.824 1.11e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi151g00084 SET 4.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi151g00084 - - vvo:131631182 494.967