Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi151g00082 ATGTCGAAAGAGAGGTCTGGTCGCGGAGGATCGGCGGGTGAACAAGTTCAGGATGTCACTGGGGGAAGGCTGAATCGTCTGCCGTCTGCTGGCGTCGGTGACATGGTGATGGCCACCGTCAAGAAGGGAAAGCCTGATCTCGTAAGAAGGTCTTGCCCGCCGTCATCGTCCGTCAGCGCAAACCTTGGCGCCGAAAGGACGGTGTTTTCATGTACTCTTGAAGATAATGCTGGTGTCATTGTGAATCCCAAGGGTGAAATGAAAGGTTCTGCTATCACTGGTCCAATTGGAAAGGAGTGTGCTGATCTGTGGCCTAGGATTGCAAGTGCAGCCAATGCACATTGTTTAAGTTGA 354 0.5226 MSKERSGRGGSAGEQVQDVTGGRLNRLPSAGVGDMVMATVKKGKPDLVRRSCPPSSSVSANLGAERTVFSCTLEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAHCLS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi151g00082 117 SUPERFAMILY Ribosomal protein L14 21 113 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sebi151g00082 117 SMART Ribosomal_L14_2 15 115 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi151g00082 117 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 19 112 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi151g00082 117 Pfam Ribosomal protein L14p/L23e 15 112 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi151g00082 117 Gene3D Ribosomal protein L14 13 113 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sebi151g00082 117 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi151g00082 Sebi-Chr151 1352179 1353060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi151g00082 22 113 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 75.532 1.78e-39 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi151g00082 K02894 - qsa:O6P43_010460 125.561