Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi151g00081 ATGAGTAACATGGCTTCATTGCCATTATCTTATTCTTCAAATAATGGACCAGTATCTTCTACAACATCAACTCATTATTCCAAGGAAACAGTGCTTCCTGGAATACAGATTCCCTGCCTAGCTTTTCTTGATTTCTCTGTGAATACGCCTATTGATAATAGTCAAGTAGAGAGCAGTGCCTGCAATATTATGGCAACTGAGGAGTACTCTAAGCGAAATGATTGGCAGGAGTGGGCCGATCAGCTAATAAGTGATGATGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGAGAACATTCAAGATCTTGAACCAAAGGTGGGGGATCAGGTTTCAAATTCATCTTCACAATTTCCAGCAGGACACCAATCCCAAGGTCACCAACAACTTCCTACTTCGTCTGGGGAAAATCGTGTTGGTGCTGCCCCATCTTCCTCAGCAAATTCTGCACCTGCCAAGGCACGGATGCGTTGGACACCTGAGCTTCATGAGGCATTTGTGGAAGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTTCAGAGAAAAAACTAAGTCCCATTGAAGAGATGTCATCTCTAGATTTGAAAACTGGTATTGAGATCACTGAAGCTCTGCGACTGCAGATGGAGGTTCAGAAGCGATTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGGGTTGAAGCATTTAAGGCATCACCATCTGCCATTGAGGGTCAATCTGGAGTGTCTTCTGATATCATGAAAGATTCTCCTGCCAAAACCGAATTGGAAGCATCCAAAGTGGAAAATGGCAGTTCAGGACCTGATCAAGCTAATGGCAGTACCACAGTAGCAGAAAGCTCGCAGGGAGAGGGTGGGAAGCAGGATGCTCCCGAAGGTCAAGCTTCTGAGAATCCTAAGCAACATACTAATCATGAAGATTGTGCTCACGCCCCAAAGCGTCCAAGGACAGATGAGTAA 1029 0.4422 MSNMASLPLSYSSNNGPVSSTTSTHYSKETVLPGIQIPCLAFLDFSVNTPIDNSQVESSACNIMATEEYSKRNDWQEWADQLISDDDTLTSNWNDLLAENIQDLEPKVGDQVSNSSSQFPAGHQSQGHQQLPTSSGENRVGAAPSSSANSAPAKARMRWTPELHEAFVEAVNQLGGSERASEKKLSPIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEAFKASPSAIEGQSGVSSDIMKDSPAKTELEASKVENGSSGPDQANGSTTVAESSQGEGGKQDAPEGQASENPKQHTNHEDCAHAPKRPRTDE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi151g00081 342 MobiDBLite consensus disorder prediction 108 153 - -
Sebi151g00081 342 SUPERFAMILY Homeodomain-like 152 188 IPR009057 -
Sebi151g00081 342 MobiDBLite consensus disorder prediction 108 157 - -
Sebi151g00081 342 Gene3D - 153 223 - -
Sebi151g00081 342 Pfam MYB-CC type transfactor, LHEQLE motif 200 247 IPR025756 -
Sebi151g00081 342 MobiDBLite consensus disorder prediction 282 306 - -
Sebi151g00081 342 MobiDBLite consensus disorder prediction 257 342 - -
Sebi151g00081 342 NCBIfam myb-like DNA-binding domain, SHAQKYF class 154 186 IPR006447 GO:0003677
Sebi151g00081 342 MobiDBLite consensus disorder prediction 322 342 - -
Sebi151g00081 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 193 325 IPR044848 GO:0003700
Sebi151g00081 342 Coils Coil 203 223 - -
Sebi151g00081 342 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi151g00081 Sebi-Chr151 1333528 1338526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi151g00081 32 312 G2-like Transcription Factor Family AT4G28610 42.901 1.37e-61 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi151g00081 Myb_CC_LHEQLE 2.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi151g00081 - - gmx:100810560 483.796