Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi151g00078 ATGTATACTTCGTCTGCTGTGTTACAGTTGATAATAAAGATTTTGAAGAGGAGAAAGAATTCTACAGAAACGCTTTTGGGTGAAGCTAGGCAACCACTATGGCGCAAAGTGGCAGTACCTTCAAGCCTAATCAACCCATATCGCATAGTCATCATCCTCCGTCTCATAATCCTACTTTTCTTCTTCCAATTTCGTATCACAACACCAGTGCATGACGCATTTGCCTTGTGGCTAATCTCTGTGGTGTGTGAGTTCTGGTTAGCACTGTCTTGGTTTGTTGACCAGTTCCCCAAGTGGTTCCCCATCACTAGAGAAACTTACTTGGACTGTTTGTCTATAAGGTTCGAGCGTGAAGGGGAACCAAGCCTTCTAGCCCCACTTGATGTCTTTGTCACCACTGCTGACCCTTTGAAGGAACCACCCATCATCACTGCAAACACTGTTCTATCAGTGTTATCTGTTGATTACCCTATTGAGAAGTACAATATTGAGCCAAGGGCTCCCGAGTTTTATTTCTCTCAGAAAATTGATTACTTGAAAGATAAGGTGCACCCCGCATTTGTAAAGGATCGCAGGGCCATGAAGGTGAGAGAGTATGAAGAATTTAAAGTGAAAATTAATGCATTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAAGGGTGGGTGATGCAGGATGGTAATCCATGGCCTGGGAATGACTCTCATGATCATCCAGGAATGATTAAGGTCTATCTGGGAAGTTCTGGTGCACGGGACAAGGATGGGAAGGAACTACCAAGGCTTGTGTATGTTTCACGGGAAATACGTCCCTGCTATCAACACAACAAAAAAGCTGGTGCCATGAATGCTTTGCTTCGAGTTTCTGCTGTGCTTACCAATGCACCTTTCGTGTTGAATCTGGATTGTGATCATTACACAAATAATAGCAAAGCTTATAAGGGAGGCTATGTGCTTTTTAATGGACCCCCAACTTGGGAAGAAGCTTTGTTATGTTCAATTTCCAAAAAGATCACCATGAAATGCCTTGATGGGATTCAAGAGATTGATGAAGAATGGCTTGATGGCTATGAGGAGCAAGAGGAATCATCCTTCATGTCCCAAAAAAAATTTGAGAAACGATTTGGACAGTCACCAGTTTTCATTGCTTCCACTTTGATGGAAGGTGGTGGACTTCCTAAAGGCATCAATTCACGATTACTAATTAAGGAAGCCATTCATGTTATAAGTTGTGGTTATGAAGACAAACTGAATGGGGCAAAGAGAGGATGGAAATCAGTGTACTGCATGCCTAAGAGAGCAGCTTTTAAAGGGTCTGTTCCAATAAATCTATCAGACCGATTGCACCAAGTTCTGAAATGGGCTCTTGGTTCGGTTGAGATTTTCCTTAGTGGCCATTGTCCATTATGCTGTTTGCCTTCTAACTGGAAAGTTCATCATCCCATTCTGTCAAACCTTGCTAGCATTTGGCTAATGGCTCTATTTATCTCCATAATTTTAGCTTGTGTGCTAGAGCTTAGATGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGAGTTGTTCCAGCACATCTTTTTGCAGTATTTCAAGGTATCCTCAGAGTTATTGCAGGAGTAGACACTAATTTAAAGGTGAGAGCAAAAGCAAGCAGAAAGACACTGTATTTGGAGAACTCTATCTCTTCAAGTGGATCTACTCTACTTATCCCACCAACCAGTCTAGTAATCTTGAACATGGTGGGAATTGTGGCTGGCATCTCAAATGCCATTAACAATGGCTATGACTCATGGGACCATTGTTTTGGAAAACTATTTTTCTCCTTTTGGGTGATCATGCACTTATACCCTTTCCTAAAAGGAGTAGACACTAATTTAAAGGTGAGAGCAAAAGCAGCAGAAGACACTGTATTTGGAGAACTCTATCTCTTCAAGTGGACTACTCTACTTATCCCACCAACCAGTCTAGTAATCTTGAACATGGTGGGAATTCCGGCTGGCATCTCAAATGCCATTAACAATGGCTATGACTCATGGGGACCATTGTTTGGAAAACTAATTTTCTCCTTTTGGGTGATCATGCACTTATACCCTTTCCTAAAAGGTCTAATGGGAAGGCAAAACAGGACTCCTACAATAGTAGTCCTCTGGTCAATACTTCTAGCACTAATTTTCTCAATAATTTGGGTTCGCATTGATATCTTCTTGCCCAAGCAAACAGGTCCAGTACTCAAACAGTGTGGATTAGAATGCTAA 2271 0.4201 MYTSSAVLQLIIKILKRRKNSTETLLGEARQPLWRKVAVPSSLINPYRIVIILRLIILLFFFQFRITTPVHDAFALWLISVVCEFWLALSWFVDQFPKWFPITRETYLDCLSIRFEREGEPSLLAPLDVFVTTADPLKEPPIITANTVLSVLSVDYPIEKYNIEPRAPEFYFSQKIDYLKDKVHPAFVKDRRAMKVREYEEFKVKINALVAKAQKKPEEGWVMQDGNPWPGNDSHDHPGMIKVYLGSSGARDKDGKELPRLVYVSREIRPCYQHNKKAGAMNALLRVSAVLTNAPFVLNLDCDHYTNNSKAYKGGYVLFNGPPTWEEALLCSISKKITMKCLDGIQEIDEEWLDGYEEQEESSFMSQKKFEKRFGQSPVFIASTLMEGGGLPKGINSRLLIKEAIHVISCGYEDKLNGAKRGWKSVYCMPKRAAFKGSVPINLSDRLHQVLKWALGSVEIFLSGHCPLCCLPSNWKVHHPILSNLASIWLMALFISIILACVLELRWSGVSIQDWWRNEQFWVIGVVPAHLFAVFQGILRVIAGVDTNLKVRAKASRKTLYLENSISSSGSTLLIPPTSLVILNMVGIVAGISNAINNGYDSWDHCFGKLFFSFWVIMHLYPFLKGVDTNLKVRAKAAEDTVFGELYLFKWTTLLIPPTSLVILNMVGIPAGISNAINNGYDSWGPLFGKLIFSFWVIMHLYPFLKGLMGRQNRTPTIVVLWSILLALIFSIIWVRIDIFLPKQTGPVLKQCGLEC 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi151g00078 756 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 420 470 - -
Sebi151g00078 756 Pfam Cellulose synthase 160 316 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi151g00078 756 Pfam Cellulose synthase 345 469 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi151g00078 756 Pfam Cellulose synthase 479 627 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi151g00078 Sebi-Chr151 1270396 1274744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi151g00078 614 756 Cell Wall Biosynthesis AT5G17420 68.531 9.08e-58 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi151g00078 K10999 - aof:109844015 716.842