Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi151g00036 ATGGAAGCAGACTACGGCAGTAATTATTCCAAAATTGAGAAGATGGAAAATCTTACAGTTCCCCCTGGTTTTGCATCCCTAACATCTTTTCTTTTGCAAAAGAGCAAAAAGGTTAAGAAAACCAAAAAATCTACAACCTTTCCAACTGCATCTGGACAAGAGCCAATCTGCATGAAGACTAAACCTGAGATGAATGACACTACTGCATATAATCGACCGTGGATAATATTTGACCAGAGCAACCACAAACCTGAGGAATCTCAAATGGCGCGTCTTCATATGGATGTCCCTTTAAATTCTTGTCGTCCAAAAGGGACCATACATGGATGTCCTAACTGCAGTGATTGTCTGAAGGTAACAGCAAGATGGCGTCCTGAGGATGCAAGAAGAGAAGTTTTGGAAGAAGTTCCTATTTTCCACCCAACAGAAGAGGAATTCAAAGACACACTTAAATATATTGCAAGCATACGCTCCAAAGCAGAACCTCATGGAATTTGTCGTATTATCCCTCCTACTTGCTGGATACCACCATGTTTTCTTGAGAAAAAAAACTTTTGGGAAAACTCCAAATTTGCTGCTCAGATTCAGCGGATTGATGGACACCAAGTTCAGCATGCAGCAGAAATTATGGCTAGCTCTCATGAAAACACAGAGACCAAGAGAAGAGGCGCAAAAGTAACTTTGGACTCTCAGATTGTTAACGGAAGCACCAGCACCACAAATAACCAGAATGTTGAAGACTGTGACAGTGGGTCTGAACCTGGTCCTAAATTCAGTCTCAAAACATTTAAGAAATTTGCAGATGAATTCAAGATCCAATATTTCAATTACAAGGGTAAGGATAAGACTATTGGTTCTGATATAAATTTAACTAGGCGTCAACAGCAGTGGGAGCCATCTGTTGAGAATATTGAGGGTGAATATGGACGGATTGCTCAAAATCCGACTGAAGAAATTGAGGTGCTTTGTGGTAATGCTTTGGATGCTGGAGATTTTGGCAGTGGATTTCCAACAGTTTCTGATCCTTTGGAGGCATACACTTGGCCTGAATATTTGAAATCTGGATGGAACTTAAATAATATACTTTCATGCTCAGATGACAAGTTTGCATGTCTTGATCATGGAAAACAGCTTTGTTCATGCACTTGGAACAATAAAGTTCTCCTCTACCGTTATGAAATCAGTGAATTGGAAGTTCTATGTCAAGCTTTGGATGGAAAACTAAGTGCAGTCTATAAATGGGCCAAAGAGTATCTTGGATTAACTTTACCTTCATCCTCCATTGCCTCCAAAAGAAAACAAACCCCAGAAAATGCAAATGGTTCAACTTACCCTTCAGATGACTTGAAGATGAAAGAACCTATATCCCAGACAGTATCAAAATGGAAAGAACGTAAATTGCAGGCAATATCAAATGCATCAGATAAGAAACAAATTGAAGTGCCTTCCCAAGTCACAGGGACTATTCATTCAAAAAAGAAGACAACTTCACTTCAGCCAAAAGTACCAGATGAGATGAAAGCAAAAAAGAAAATGATGGGAAGGATTAATTCTGCTGGCATCAAGACTGATATGAAGGCACTTGGGAATAAATTTACAATTTCAAAGAAAGTTGCAGACCCAAAACCGAAAGTATCAACAGTTTCTTCAATTGCAAGCTCACATTACATTTCTTTTCTACAAGAAAGCATGTTACCTGAAGTTTTATCTGACAGTACGAGCACATCTTCGTCTTCAGAATCTGATGGCTCATAA 1755 0.3909 MEADYGSNYSKIEKMENLTVPPGFASLTSFLLQKSKKVKKTKKSTTFPTASGQEPICMKTKPEMNDTTAYNRPWIIFDQSNHKPEESQMARLHMDVPLNSCRPKGTIHGCPNCSDCLKVTARWRPEDARREVLEEVPIFHPTEEEFKDTLKYIASIRSKAEPHGICRIIPPTCWIPPCFLEKKNFWENSKFAAQIQRIDGHQVQHAAEIMASSHENTETKRRGAKVTLDSQIVNGSTSTTNNQNVEDCDSGSEPGPKFSLKTFKKFADEFKIQYFNYKGKDKTIGSDINLTRRQQQWEPSVENIEGEYGRIAQNPTEEIEVLCGNALDAGDFGSGFPTVSDPLEAYTWPEYLKSGWNLNNILSCSDDKFACLDHGKQLCSCTWNNKVLLYRYEISELEVLCQALDGKLSAVYKWAKEYLGLTLPSSSIASKRKQTPENANGSTYPSDDLKMKEPISQTVSKWKERKLQAISNASDKKQIEVPSQVTGTIHSKKKTTSLQPKVPDEMKAKKKMMGRINSAGIKTDMKALGNKFTISKKVADPKPKVSTVSSIASSHYISFLQESMLPEVLSDSTSTSSSSESDGS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi151g00036 584 Pfam jmjN domain 137 170 IPR003349 -
Sebi151g00036 584 MobiDBLite consensus disorder prediction 234 249 - -
Sebi151g00036 584 PANTHER LYSINE-SPECIFIC DEMETHYLASE 371 503 - -
Sebi151g00036 584 MobiDBLite consensus disorder prediction 429 445 - -
Sebi151g00036 584 MobiDBLite consensus disorder prediction 429 450 - -
Sebi151g00036 584 MobiDBLite consensus disorder prediction 234 253 - -
Sebi151g00036 584 Gene3D Cupin 121 382 - -
Sebi151g00036 584 ProSiteProfiles JmjN domain profile. 136 177 IPR003349 -
Sebi151g00036 584 SMART JmjN_1 135 176 IPR003349 -
Sebi151g00036 584 Pfam C5HC2 zinc finger 363 398 IPR004198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi151g00036 Sebi-Chr151 586080 590424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi151g00036 364 431 JUMONJI Transcription Factor Family AT1G08620 52.941 2.05e-17 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sebi151g00036 zf-C5HC2 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi151g00036 K11446 - gmx:100804864 529.25