Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi151g00032 ATGCATTTGAGAAGCAAAAAGGTGATAACTCTTCAGATTAAAGTGGGAGAATCCAATGGATGCCAGAGTGGTGAGACAGAAAAGTTTGAGCAACAAATCCCTTGCACCTTCATACATGAAGATAAACAAGAGCATGCTGTGACAGCTCTACTGAATTTGTCAATTAATGACAACAACAAGACCTTGATTATGGAAGCAGGAGCTATAGAACCACTTATCCATGTTTTGCAGACAGGAAATGATGGTGCCAAGGAGAATTCTGCTGCAGCTCTATTCAGCCTCTCTGTATTAGAAAACAATAAGCCAAAAATTGGTCGTTCTGGTGCAGTTAAAGCTTTGGTGGATCTTCTAGCCTCAGGAACTCTGAGAGGGAAGAAGGATGCTGCAACTGCTTTATTTAACCTGTCAATTTTTCACGAGAATAAAGCTCGTTCTCAAAGGGGAAAGGAAAATGCTGCTTCCATTCTCTTGCAACTATGCCTTCATAGTGGTAAATTTTGTACACTGGTTCTTCAAGAAGGAGCTGTACCTCCACTAGTTGCATTATCTCAGTCTGGTACACCAAGAGCAAAGGAAAAGGCACAACAGCTTCTCAGTCATTTTCGTAATCAGCGTGAAGGAGCTATGGGGAAGGGAAAATCATGA 645 0.4155 MHLRSKKVITLQIKVGESNGCQSGETEKFEQQIPCTFIHEDKQEHAVTALLNLSINDNNKTLIMEAGAIEPLIHVLQTGNDGAKENSAAALFSLSVLENNKPKIGRSGAVKALVDLLASGTLRGKKDAATALFNLSIFHENKARSQRGKENAASILLQLCLHSGKFCTLVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRNQREGAMGKGKS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi151g00032 214 SMART arm_5 56 96 IPR000225 GO:0005515
Sebi151g00032 214 SMART arm_5 97 137 IPR000225 GO:0005515
Sebi151g00032 214 SUPERFAMILY ARM repeat 41 201 IPR016024 -
Sebi151g00032 214 PANTHER U BOX DOMAIN-CONTAINING 145 202 - -
Sebi151g00032 214 Gene3D - 144 203 IPR011989 -
Sebi151g00032 214 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 67 109 IPR000225 GO:0005515
Sebi151g00032 214 Gene3D - 36 143 IPR011989 -
Sebi151g00032 214 Pfam Armadillo/beta-catenin-like repeat 100 136 IPR000225 GO:0005515
Sebi151g00032 214 Pfam Armadillo/beta-catenin-like repeat 56 95 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi151g00032 Sebi-Chr151 506737 508595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi151g00032 43 212 U-box Gene Family AT2G23140 55.066 4.05e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi151g00032 - - jre:108996017 207.994