Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi151g00014 ATGGAACTGAACCACAATCTCTCTTACAAGCTTCTATATCAAGCTCTTCCACCCATCAAAACCCAGCTTAATACAATCCATCACTCACCACAACCTCCTTTAGACTCTGCTTTACCCATATTTGCCATTGTTGTGATCAGCATCTTGGCAACCAGTATCATACTTATAAGCTACTTAACTTTTGTGACCAAATTCTGCTCAAACTGGCATCAAATTAACCCATTGAGATGGATTTCCAACCTGCGAGCTCAACAGAATGAAGATCCCTTTATAGCATTCTCTCCAAGAATGTGGATCCAGGGGCTTGATGAATCTGTGATCCAAGAAATCCCAACATTTCAATTCATAAAAGGAGAAGGTGGTGATGATCAAAGTGTGTATAGTTGTGTGGTTTGTTTGACAGAGTTTCAAGAACAGGATATGCTAAAAGCTCTGCCTAATTGCAGCCATGCCTTTCACTTGGATTGCATTGACATTTGGCTTCAAACAAATTCAAATTGCCCTCTTTGTAGATCAAGCATTTCAGGCAACACAAGCTGTCCAATGGACCATATCATAGCTCCAAGCTCTTCTCCTCAGGATTCTCAATTGCTCTCTAACATGGGAAATGATGAAGATTTTGTGGTCATTGAATTGGGGAGAGAAAATGGGGGAACATTGCCTCAGATTCAGAGAGAAAGAAATGACTCAAGGGAAAGCAGTAGAAGTCACTCAACAAGGAAGATGGAGCAGAAGCTGATGCACTTGAAACCAAAGAAGTGGCACCATGTTTCAATCATGGGAGATGAGTGTATTGATGTTAGAAAGAAAGATGATCAGTTTTCTATTCAGCCTATAAGAAGATCTTTCTCAATGGATTCTGCAAATGATAGACAAGTTTACTTAGATGTTCAAGCCAGAGTACAACAGAATAGACATCACACTGAGGCTAGTGCTAGTGAAGATTGTAATAGCACAGGCCGAAGATCATTCTTTCCATTTTGTTATGGTCTGGGATAA 999 0.4014 MELNHNLSYKLLYQALPPIKTQLNTIHHSPQPPLDSALPIFAIVVISILATSIILISYLTFVTKFCSNWHQINPLRWISNLRAQQNEDPFIAFSPRMWIQGLDESVIQEIPTFQFIKGEGGDDQSVYSCVVCLTEFQEQDMLKALPNCSHAFHLDCIDIWLQTNSNCPLCRSSISGNTSCPMDHIIAPSSSPQDSQLLSNMGNDEDFVVIELGRENGGTLPQIQRERNDSRESSRSHSTRKMEQKLMHLKPKKWHHVSIMGDECIDVRKKDDQFSIQPIRRSFSMDSANDRQVYLDVQARVQQNRHHTEASASEDCNSTGRRSFFPFCYGLG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi151g00014 332 CDD RING-H2_EL5-like 128 171 - -
Sebi151g00014 332 MobiDBLite consensus disorder prediction 225 243 - -
Sebi151g00014 332 SMART ring_2 129 170 IPR001841 -
Sebi151g00014 332 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Sebi151g00014 332 MobiDBLite consensus disorder prediction 218 243 - -
Sebi151g00014 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 178 IPR013083 -
Sebi151g00014 332 PANTHER RING-H2 FINGER PROTEIN ATL16 20 330 IPR044600 GO:0016567|GO:0016740
Sebi151g00014 332 Pfam Ring finger domain 128 171 IPR001841 -
Sebi151g00014 332 SUPERFAMILY RING/U-box 106 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi151g00014 Sebi-Chr151 249494 250492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi151g00014 38 306 C3H Transcription Factor Family AT1G04360 46.644 4.44e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi151g00014 K19041 - gmx:100809883 474.937