Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi151g00001 ATGGAAGGAAACTATCTGACCAGAAACACACATAAAGGGGAGAGCTTTGGGTTTCATGAGGAGCACACATGGGGAACATCATGGCCTGCAAGAAACTATGCTTGTAGCTTTTGCAAAAGAGAGTTCAAATCTGCTCAAGCTCTTGGTGGTCACATGAATGTTCATAGAAGGGATAGGGCAAGATTGAGATCATCCTTATCCTCATGGGTTTCTCATGATTCTCCTCCTAAACCTAACCCTACCTTTGCTAATAACCCAACAACTACTACTACTCATCTATCCTCACCACCATCATCATATCTATCTGATGCACTTTTGAATTGTACACACCGTTCTCCACTTTATTGTCCCTGTCTCACTTTATCTTCTTCAGTACTGTCCCCAACCACTACCACCACCAGTGCTGGAGATAAGAAACCAAGACTCACATCTTCACACCTTCCTCCTTTGAGTCCTCAAATTAAGATCTTTAGAGGTTGTGCTGATCATGAACACAATAAAGTACTCTTCAAGAATAATAATGAGCACAACATCACTTTGGAGTTGGGAATAGGATTGCTTAATCAACCAAAGGAGAACTTAGATTTGGAGCTAAGATTGGGGCAATTCTAG 612 0.415 MEGNYLTRNTHKGESFGFHEEHTWGTSWPARNYACSFCKREFKSAQALGGHMNVHRRDRARLRSSLSSWVSHDSPPKPNPTFANNPTTTTTHLSSPPSSYLSDALLNCTHRSPLYCPCLTLSSSVLSPTTTTTSAGDKKPRLTSSHLPPLSPQIKIFRGCADHEHNKVLFKNNNEHNITLELGIGLLNQPKENLDLELRLGQF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi151g00001 203 MobiDBLite consensus disorder prediction 65 97 - -
Sebi151g00001 203 Gene3D Classic Zinc Finger 9 75 - -
Sebi151g00001 203 Pfam C2H2-type zinc finger 33 57 - -
Sebi151g00001 203 PANTHER OS07G0101800 PROTEIN 16 202 - -
Sebi151g00001 203 SMART c2h2final6 33 55 IPR013087 -
Sebi151g00001 203 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
Sebi151g00001 203 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Sebi151g00001 203 MobiDBLite consensus disorder prediction 127 148 - -
Sebi151g00001 203 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi151g00001 Sebi-Chr151 1086 1697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi151g00001 21 201 C2H2 Transcription Factor Family AT3G23130 39.286 4.06e-25 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi151g00001 zf-C2H2_6 6.5e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi151g00001 - - gmx:102660083 167.162