Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi150g00028 ATGGGAAGCAGAAAGGAAGAAGAGAAGAACGAGAAAATTATCAGGGGTCTCATGAAGCTTCCGCCGAATCGAAGATGTATCAACTGTAATAGTTTGCTTAAACTTAAACCTTTGGCGCTAAAGTGGGATAGTTTGAGAACTGAGAAGGGACCGCAATATGTATGCACAAACTTTTGGACCTTTATTTGCATGACATGCAGTGGAATACATCGTGAGTTTACACATCGTGTGAAGTCTGTGTCAATGGCAAAGTTCACTTCACAAGAAGTTGATGCTCTTCAAAATGGTGGTAACCAGCGTGCAAGGGAAATATATTTGAAAACTTGGGACTTCCAAAGGCAGCGGTTGCCAGATAGCAGCAATGTTGATAAAATAAGGGAGTTTATAAGGAATGTGTATGTGGATAGAAGATATGCTGGAGCAAAGTCTTCTGAAAAGCCTCCAAGAGATGCACAGGCAATATACTTGGATATTGATTTGTTTCTCAGAATTTCTTTTTTCAGCTTAAGCCCTATAATTCAAGAAGATGAGATTAGGCGTGCCAGTTCTTATCATTCATATTCTCAAAGTCCTCCATATGATTATCAATATGAGGATCGGCGCTATGGAAAACAAGCAGCTGCTTTAACCAGGAAACCTGGTTCAGATAAAGCTCGTTATGAAGGGAAAATGTCCAGTATTATCTATAGTCCTGGTCGCTTCAGCGATCATGCATATGATGACAGATTTGCAAATGAGGGATCTTCTGGTCCTAGAATTTCTGATTTTCTGTGTCTAGTGGTTGTGAGCAATTCAAATCAGATGCTCAATCTCCTAAGTCTAATAAGGAGATTGGGTTTAGCAGTCCATCCTATCAGCGTTCTGGTTCCAGCTCAAGTGAAGATGTATGGTCTCAAGCAAGAAATGCATCTCTGGAAACTAATGCCAGTGCCAAGAGAGATGCAGATGGAATTCATCGTCTGCAGCAAGCTGATCCTGTATATCTCTGATGTCTTTCACATGAGTGACATTATATTGCATTCTTTCCCAGAGAACTATATCATTGCAACCGGCAGACAGCGCTCTTCATCCTTAAGATCTTACAATTCTGGTGGTTTAGTTGATTTTTTCTCAGAACCTGTCCAATCTTCAGGATCCCTTCAGAATAAAGCATCAGGAATTCCACCACCATCTGGTCCTACCAGAACTGTTAGCTTGGACCTTTCCAAGGCACCACCGGCATCAGCTTCATCTGTTGATCTTTTTCAATTACCAGCAGTACCATCTCAAGCTCCATTGATGGATCTGTTTCAATTATCTGATATGTCAGCAGCTCCATCTTTCAATGGGAATCAACTTACACAAACATCCCAACTCACATCTATTGACTTATTTGTGGATCTACCTCAGCAGCCTTCTACTGCAACCTCAGATGAGAAATCATTGGAGTTATCTGTCCCTAAAAATGAAGGGTGGGCAACGTTTGATACGCCTCAGTGCGCATCATCTACTGCACAGCTGGAAATTCCAGCTGTGGTACCTTCAAGTGCTGAACCTTTGCAGGATAGATTCGATCCATTTTCAACCGTAAATGCAAATATGCAATGGCCATCTTTTGAAATTTCTAGTGCCAGTGTACCTTCTGTTACATCTAATATATGGCATGATGGTGTGTGGAATGGAGGAGAACAAGTTTCTGCAATGGCAACAAACACTGAACCATGGAATGCATTTGAAGATTCTGGTAACCATCTTCCTGTGGATACTGTTAGTCAAGGATTACAGTTGCCCAATTTTCCATCAGCTGATGATCATAGTTTGGGTTTACGAGCTTCTGAGGGTGATATTCAACCTAATGGAATCAATTGTAAATCAACTAATCCATTTGATTTTCCCTATGATTCTGATGTAGATCACAGCAGTATGTTCCTTGATATGAACACTTTGCAAGCTGCTCTGCCAGATGCCCTGTTGCCAGCCACCTTTCATGGTGGTATAGCTGAACCCTGGCTCCCTCAAAGTACAGTGACCCCATATATTTCCTCTGCAGAAGGTGGTTTGTCATTCATGGCTGTGCAAACACCAAGTACTCAATTACAGTAA 2082 0.415 MGSRKEEEKNEKIIRGLMKLPPNRRCINCNSLLKLKPLALKWDSLRTEKGPQYVCTNFWTFICMTCSGIHREFTHRVKSVSMAKFTSQEVDALQNGGNQRAREIYLKTWDFQRQRLPDSSNVDKIREFIRNVYVDRRYAGAKSSEKPPRDAQAIYLDIDLFLRISFFSLSPIIQEDEIRRASSYHSYSQSPPYDYQYEDRRYGKQAAALTRKPGSDKARYEGKMSSIIYSPGRFSDHAYDDRFANEGSSGPRISDFLCLVVVSNSNQMLNLLSLIRRLGLAVHPISVLVPAQVKMYGLKQEMHLWKLMPVPREMQMEFIVCSKLILYISDVFHMSDIILHSFPENYIIATGRQRSSSLRSYNSGGLVDFFSEPVQSSGSLQNKASGIPPPSGPTRTVSLDLSKAPPASASSVDLFQLPAVPSQAPLMDLFQLSDMSAAPSFNGNQLTQTSQLTSIDLFVDLPQQPSTATSDEKSLELSVPKNEGWATFDTPQCASSTAQLEIPAVVPSSAEPLQDRFDPFSTVNANMQWPSFEISSASVPSVTSNIWHDGVWNGGEQVSAMATNTEPWNAFEDSGNHLPVDTVSQGLQLPNFPSADDHSLGLRASEGDIQPNGINCKSTNPFDFPYDSDVDHSSMFLDMNTLQAALPDALLPATFHGGIAEPWLPQSTVTPYISSAEGGLSFMAVQTPSTQLQ 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi150g00028 693 Pfam Putative GTPase activating protein for Arf 12 139 IPR001164 GO:0005096
Sebi150g00028 693 PANTHER ARFGAP/RECO-RELATED 1 256 IPR044820 GO:0005096
Sebi150g00028 693 Gene3D Arf GTPase activating protein 2 149 IPR038508 -
Sebi150g00028 693 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 146 IPR001164 GO:0005096
Sebi150g00028 693 SUPERFAMILY ArfGap/RecO-like zinc finger 10 139 IPR037278 -
Sebi150g00028 693 PRINTS HIV Rev interacting protein signature 77 98 IPR001164 GO:0005096
Sebi150g00028 693 PRINTS HIV Rev interacting protein signature 59 76 IPR001164 GO:0005096
Sebi150g00028 693 MobiDBLite consensus disorder prediction 377 399 - -
Sebi150g00028 693 SMART arf_gap_3 11 146 IPR001164 GO:0005096
Sebi150g00028 693 CDD ArfGap_AGFG 11 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi150g00028 Sebi-Chr150 1270405 1276284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi150g00028 14 133 C2H2 Transcription Factor Family AT4G05330 30.534 2.62e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi150g00028 K15044 - gmx:100794964 807.364