Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00178 ATGGGTAGAAACAATTGCATTGATCAATCTCACGTGAACTCTCTGGATGAAGAAAATTTCCTCACAGAAATGGTGCAGCAGCAACAATCAAGTTTCCCTTTTGAGAGTGGTTACCACTCTTCTTCCACCATGCAATGTAACAAAAATGCTTTCACTATCATTGATGGTGGAACCACTACCTTATCGTATGATGAGGGGCAGGGGAAAATGCTCAATAATGATATCTTTAACTCTAACTCTATCATCTCTCATCAAGATGCTACTTCAAACAATCATATACCAAATCCAAACACATTCATTTTGTCATTCTCAACTATGGAACAAGCTCTCCATCATGAACCTTCTTCCCCCAAACTTGTTGATGCCCCTGCATCTGCCTTTTTGTGCAAAGAAACATCCCTGAATGACTATATCACTGAACCAAAGGTGAAGCAACAGACCAATAAGAAGTGTAGAAGCTCATCTGAGGTAAATGATCACATAATGGCTGAGAGAAAAAGGAGACAACAACTCACTGAGAGGTTCATAGCACTTTCTGCCACCATACCAGGATTGAAGAAGACAGATAAGGCATATATACTCCGAGAAGCTATCAATTATATGAAACAACTACAAGAGAGGGTAAAAGAGCTAGAGAATGAGAACAAAAGGAAAACAACTGAATCTACAGTGATATTCATCAAGAAATCCCAGGTGTGCTCAAAAGAGGAAACCACTTCTTCTTCATCATGTGAAACGAACTCTGATAGATTCAAGAAAGCATTGCCTCAGGTTGAAGCAAGAGTCTTAGAGAAAGAGAAGGAAGTTCTCATTGGAATACACTGTGAGAAACAAAAGGACATTGTGCTTAGAATAATGGCATTGCTTCAAAATCTTCATCTCTCTCTTGCTAGTAGTAGCGTATTGCCATTTGGGACCTCCACTTTAAAAGTTACAATTATTGCTCGGATGGATGATGAATACTGCATGAGCGTGAATGATCTAGTAAAAAACCTGAGGCATGATCTCTTGGAGTTACATGACATTGAAGAGTAA 1035 0.3903 MGRNNCIDQSHVNSLDEENFLTEMVQQQQSSFPFESGYHSSSTMQCNKNAFTIIDGGTTTLSYDEGQGKMLNNDIFNSNSIISHQDATSNNHIPNPNTFILSFSTMEQALHHEPSSPKLVDAPASAFLCKETSLNDYITEPKVKQQTNKKCRSSSEVNDHIMAERKRRQQLTERFIALSATIPGLKKTDKAYILREAINYMKQLQERVKELENENKRKTTESTVIFIKKSQVCSKEETTSSSSCETNSDRFKKALPQVEARVLEKEKEVLIGIHCEKQKDIVLRIMALLQNLHLSLASSSVLPFGTSTLKVTIIARMDDEYCMSVNDLVKNLRHDLLELHDIEE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00178 344 Pfam Helix-loop-helix DNA-binding domain 160 205 IPR011598 GO:0046983
Sebi14g00178 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Sebi14g00178 344 PANTHER BHLH TRANSCRIPTION FACTOR 17 337 - -
Sebi14g00178 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 222 IPR036638 GO:0046983
Sebi14g00178 344 Coils Coil 194 221 - -
Sebi14g00178 344 SMART finulus 161 210 IPR011598 GO:0046983
Sebi14g00178 344 Gene3D - 152 225 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00178 Sebi-Chr14 3503894 3507783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00178 151 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 46.524 1.07e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi14g00178 HLH 4.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00178 - - gmx:100786209 367.466