Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00175 ATGGAGGAGGATAATAATTTCTTCAATCAAAGGCAGAGAATGAACTTTTTCAATTTGCAGCAGCAAGTTTTGTGTCATGAAACAGAAAGCCACTATCCCTACCCTTCTTTATCCAACACTCTTGTTGAGGCTTCCACCACCACCACCAATTTGCAAAGATCTCATCTTTATGTCCAAAACAACCCTTCAACTACCATTCTTGACAAGTTCATGAATGAGACAGCATCTTTTCACAGCTTTGGCACTAACAGCATCCCCAAAGATGGTGCAGAAAATGCTCTCTCCAGCCACATTTTGCCTTTTATGAACTCAACTACTGTGGAACCTGTCAGCAACATGAGACATGGCTCTGTTTTAGGGTCCTTCAAAAGGAACCATAATTGCAAACCAGGGACTCACAAGAAGGTTAGAAGCTCCGCTGAGACAGCAGGTCACATAGAGGCAGAGAGAAAAAGAAGACAGAAAATGACTCAGAACTTCATAGCACTTTCAGCCATCATTCCTGGCTTGAAGAAGACAGACAAGTCTTATATACTTCAAGAAGCAATCAATTATGTGAATCAACTTCAAGAGCGTGTAAGAGAACTAGAAACAGAGAACGAAAAGATAAATGCACATTCAGTAATGCTGAACAAGAAACTCATCATCAGGCTCCCCATGAATGAAGACTCAACCACCACAAGTGAAACAAACTTCGTTGGTAATACTAATAGATTTTTTCTTGAAGCACTACCTGAGGTTACAACAAGAGTCTCAGAGAAGAATGTGCTCATTGCAATCCATTGTGAGAAGCAAAATGTAGTTGTACACAAAATACTAAACTTGCTTGCAAATCTCCACCTCTCTATAACATCTAGTAGCGTATTGCAATTTGGTGCTTCCACCCTTATAATCACAATTATTGCCCAGATGGATGAGGAGTATAGTATGGCAATAGATGATCTGGTGAAAACCCTAAGGAAAGAGTTGCTGAAGTCACATGATGTTCAACAATGA 996 0.4006 MEEDNNFFNQRQRMNFFNLQQQVLCHETESHYPYPSLSNTLVEASTTTTNLQRSHLYVQNNPSTTILDKFMNETASFHSFGTNSIPKDGAENALSSHILPFMNSTTVEPVSNMRHGSVLGSFKRNHNCKPGTHKKVRSSAETAGHIEAERKRRQKMTQNFIALSAIIPGLKKTDKSYILQEAINYVNQLQERVRELETENEKINAHSVMLNKKLIIRLPMNEDSTTTSETNFVGNTNRFFLEALPEVTTRVSEKNVLIAIHCEKQNVVVHKILNLLANLHLSITSSSVLQFGASTLIITIIAQMDEEYSMAIDDLVKTLRKELLKSHDVQQ 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00175 331 PANTHER BHLH TRANSCRIPTION FACTOR 18 325 - -
Sebi14g00175 331 Coils Coil 179 206 - -
Sebi14g00175 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 189 IPR011598 GO:0046983
Sebi14g00175 331 SMART finulus 146 195 IPR011598 GO:0046983
Sebi14g00175 331 MobiDBLite consensus disorder prediction 121 144 - -
Sebi14g00175 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 209 IPR036638 GO:0046983
Sebi14g00175 331 Pfam Helix-loop-helix DNA-binding domain 145 190 IPR011598 GO:0046983
Sebi14g00175 331 Gene3D - 132 206 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00175 Sebi-Chr14 3422059 3427186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00175 76 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.903 8.93e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi14g00175 HLH 8.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00175 - - vvo:131617999 258.455