Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00173 ATGGCTTCTCAAGTTGGTGATGGTGTTATACATTACAATGAATCGTCTCCACTCTCAAATCGCCGCTTCTCTACCGATGTGGCAGCGGCAGCGACCACCACGGACTCGAGCTTCGTGGAGGCGTGGAAGAAAGTGAGCCCCAACATCGACCCACCCAAGACTCCCCTCGCCTACATGAAGCCTCGTCCCCCTACACCTTCTACCCTCCCTTCTAAGCTCACCGTCAATTTCGTCCTTCCCTACGCTTCCCAATTGTCCGCAAAAGAGGTTGATATGGTCATAGTACCAGCAACAACTGGTCAGATGGGTGTTCTCCCAGGACATGTAGCAACAATCGCAGAGTTGAAACCTGGGGTCCTATCTGTACATGAAGGGAATGATGTGACCAAGTATTTTGTCAGCAGCGGCTTTGCTTTCATCCATGCAAACTCTGTTGCTGATATAATAGCTGTTGAGGCTGTACCAGTAGATCGAATTGATGCAAACCTAGTCCAGAAAGGTCTTCAAGAGTTCACTCAGAAGCTGAGCACAGCCACAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGAGTTGATGTGCATAGCGCCCTCAACGCAGCTCTTTCAGCCTAA 612 0.4967 MASQVGDGVIHYNESSPLSNRRFSTDVAAAATTTDSSFVEAWKKVSPNIDPPKTPLAYMKPRPPTPSTLPSKLTVNFVLPYASQLSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQKGLQEFTQKLSTATTDLEKAEAQIGVDVHSALNAALSA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00173 203 Gene3D - 160 202 - -
Sebi14g00173 203 Coils Coil 168 188 - -
Sebi14g00173 203 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 34 202 IPR001469 GO:0015986|GO:0045261|GO:0046933
Sebi14g00173 203 CDD F1-ATPase_delta 73 196 IPR001469 GO:0015986|GO:0045261|GO:0046933
Sebi14g00173 203 Gene3D - 63 159 IPR036771 -
Sebi14g00173 203 Hamap ATP synthase epsilon chain [atpC]. 71 191 IPR001469 GO:0015986|GO:0045261|GO:0046933
Sebi14g00173 203 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 73 154 IPR036771 -
Sebi14g00173 203 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 73 145 IPR020546 GO:0015986
Sebi14g00173 203 NCBIfam ATP synthase F1 subunit epsilon 78 189 IPR001469 GO:0015986|GO:0045261|GO:0046933
Sebi14g00173 203 FunFam ATP synthase delta 62 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00173 Sebi-Chr14 3397904 3402920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00173 15 203 Primary Pumps ATPases AT5G47030 74.074 2.05e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00173 K02134 - gmx:100799603 311.227