Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00159 ATGGCTGGTGTGGGTGGGGTGTTTGATTCTGTGAAAAGTATTTACCGTGGGAAAGAGACATGGAGGCTTAAGGTTCGTGTTGTGAGGATGTGGGTGATATGTGCAAAGGAAAATCCCTCTAATGTGTTCTCGGTTGAAATGGTTTTAGTTGATGCCAAGGGTGGAAGAATTCAAGCAAGCATAAGGAAGGCTATGTTGAAGAAGTTCATGGGCAATGTGATTGAGGGTGCTGCCTATAAGATGACATTTTTTGGTGTCATTGATAATGTTGGCACTTATAGAGCAACTACTCATGACTACAAGTTGTTGTTCCAGCCTAGGACCAAGATATATCCCCGTGAGAGTGAAATAATACCAAGGTTTGGGTTTGATTTGAGGAGTTCCCACGAAATCCATGAAGCAGATGTGGGCTCTGAATATCTATTTGATTTCATGGGTGTGTTGACAGGGGTTGGGGAAGAAAAACAGTATGAAAAATTCAATCGGACCATAAGGGTGCTTGAGCTGGAGCTCACTGATGACAAGGGTGTTGTTAGGTGCTCATTGTTTGGGCATTTCATTGATCTCATGAAAGATTATTTGAATAATCGTTCTGTTGATGAGCTTGATATTGTGGTTATCCAGTTTGCTAGATTGACTCCAATTTCTGGTGGAGGGTCATCCAATGTTGCAATGTGCCTGGCCCCTCAGAAGCGTAAGGGTGCTCCTCGTGGTGATCGAGCTGCAGCAAGCAAGAAAAAGGCCCTTGGGAGGCCAATGAAGATTGAGAAGGAGTAG 777 0.4389 MAGVGGVFDSVKSIYRGKETWRLKVRVVRMWVICAKENPSNVFSVEMVLVDAKGGRIQASIRKAMLKKFMGNVIEGAAYKMTFFGVIDNVGTYRATTHDYKLLFQPRTKIYPRESEIIPRFGFDLRSSHEIHEADVGSEYLFDFMGVLTGVGEEKQYEKFNRTIRVLELELTDDKGVVRCSLFGHFIDLMKDYLNNRSVDELDIVVIQFARLTPISGGGSSNVAMCLAPQKRKGAPRGDRAAASKKKALGRPMKIEKE 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00159 258 Gene3D - 118 226 IPR012340 -
Sebi14g00159 258 SUPERFAMILY Nucleic acid-binding proteins 8 114 IPR012340 -
Sebi14g00159 258 Pfam Domain of unknown function DUF223 46 111 IPR003871 -
Sebi14g00159 258 CDD RPA1_DBD_A_like 22 110 - -
Sebi14g00159 258 MobiDBLite consensus disorder prediction 230 258 - -
Sebi14g00159 258 SUPERFAMILY Nucleic acid-binding proteins 135 217 IPR012340 -
Sebi14g00159 258 Gene3D - 9 114 IPR012340 -
Sebi14g00159 258 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00159 Sebi-Chr14 2972920 2974305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00159 15 196 Core DNA Replication Machinery Family AT5G45400 23.936 2.38e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00159 - - lja:Lj0g3v0341019.1 201.83