Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00157 ATGGATGAGTCATGGGAATATTTGCTTTCTGATATGGAAATGGATGATTGTCCTTTATTCAATGAATACAATTACATGAACTCTTTTGAGGAAGAGTTAATGATCAATGGAGAGATTTCACTACAATCAGAACTATCTTTGGAAGGCCAATCTTCCAATTCAAATTTCACTACTCAAAACATCCATGTTGCTGCTGCAGGCAATAACAACACTATGAACAATTCACTACTTTCGGAAGAGAACACTGATTTTAGTCTCAAACAACATGCTTCCTCGGAGTCTTTAGAGGAATGCACCGTTGTAGTGCCAAATAATATTCCCAAGGAAACACACGAAAAACATTATGATGATGAACAATCAAAGGAGAACCAAGAGGAACTACAAAATAGAAAATCCAAGAGGTGTAGAAGCTCTTCTCAGATACAAGATCACATTATCGCTGAGAGAAAGAGAAGAGAAAATCTCACCAAATTATTCATAGCACTTTCAGCGGTTGTTCCTGGCTTGAAAAGGATGGATAAGGCTTCTATCATCAAAAATACTATCGAATATGTGAAATGTCTTCAGAAGAGTGTAAAAGATTTAGAGGAGCAGACCAAGCAAAGAAAAACAGAATCCGTGGCATGCTTCAAAAACGACAAAGCCGTTGCTGATGACTCTGAACCTACGAAGAAGAGATTCCCCATTGTTGAAGCAAGAGTCTCAGCAAAAGATCTACTCATCAGAGTTATGTGTGAGAATCGAAAGGGCATTGTAATTAAACTATTGACCAAGCTTGAAGCTCATAATCTCTCTGTACTTTGTAGCAATGTTTTGCCATTTGGGAATTCTACTCTGAACATTGACATCATTGCTCAGGTGGACCACGAAAGATTCAACATGACAATGGACGACCTAGTGGAAAATGTGATCAAGGATTTGTTGGGGTGTTGTAATAACTTGCAACAATAA 951 0.3785 MDESWEYLLSDMEMDDCPLFNEYNYMNSFEEELMINGEISLQSELSLEGQSSNSNFTTQNIHVAAAGNNNTMNNSLLSEENTDFSLKQHASSESLEECTVVVPNNIPKETHEKHYDDEQSKENQEELQNRKSKRCRSSSQIQDHIIAERKRRENLTKLFIALSAVVPGLKRMDKASIIKNTIEYVKCLQKSVKDLEEQTKQRKTESVACFKNDKAVADDSEPTKKRFPIVEARVSAKDLLIRVMCENRKGIVIKLLTKLEAHNLSVLCSNVLPFGNSTLNIDIIAQVDHERFNMTMDDLVENVIKDLLGCCNNLQQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00157 316 PANTHER BHLH TRANSCRIPTION FACTOR 10 305 - -
Sebi14g00157 316 MobiDBLite consensus disorder prediction 110 139 - -
Sebi14g00157 316 Pfam Helix-loop-helix DNA-binding domain 143 189 IPR011598 GO:0046983
Sebi14g00157 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Sebi14g00157 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 205 IPR036638 GO:0046983
Sebi14g00157 316 Coils Coil 178 205 - -
Sebi14g00157 316 Gene3D - 135 209 IPR036638 GO:0046983
Sebi14g00157 316 SMART finulus 145 194 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00157 Sebi-Chr14 2964641 2967147 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00157 124 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 45.685 3.82e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi14g00157 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00157 - - gmx:100815351 259.225