Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00150 ATGGCATCAATGGATGAGTCATGGGAAATTTTGCTTTCTGATTTGGAAATGGATGATTGTCCTTTATTCAATGAATACCATTACATGATGAACTCTTTTGAGGAAGAGTTAATGATCAATGGAGAGATTTCACTACAATCAGAACTATCTTTGGAAGGCCAATCTTCCAATTCAAATTTCACTACTCAAAACATCCATGTTGCTGCTGCAGGCAATAACAACACTATGAACAATTCACTACTTTCGGAAGAGAACACTGATTTTAGTCTCAAACAACATGCTTCCTCGGAGTCTTTAGAGGAATGCACCGTTGTAGTGCCAAATAATATTCCCAAGGAAACACACGAAAAACATTATGATGATGAACAATCAAAGGAGAACCAAGAGGAACTACAAAATAGAAAATCCAAGAGGTGTAGAAGCTCTTCTCAGATACAAGATCACATTATCGCTGAGAGAAAGAGAAGAGAAAATCTCACCAAATTATTCATAGCACTTTCAGCGGTTGTTCCTGGCTTGAAAAGGGAAATGGATGATTGTTATTTATTCAATGAATACAATTACATGAACTCTTTTGAGGAAGATTTAATCATCAATGGAGAGATTTCACTACAATCAGAACTATCTTTGGAAGGCCAATCTTCCAATTCAAATTTCACTACTCAAAACATCCATGTTGCTGCTGCAGACAATAACAACACTATGAACAATTCACTTTCAGAAGAGAACACTGATTTTAGTCTCAAACAACATGCTTCCTCGGAGTGTTTAGAGGAATCCACCGTTGTAGTGCAAAATAATATTCCCAAGGAAACACACGAAAAACATTATGATGATGAACAATCAAAGGAGAACCAAGAGGAACTACAAAATAGAAAATCCAAGAGGTGTAGAAACTCTTCTCAGATACAAGATCACATTATCGCTGAGAGAAAGAGAAGAGAGAATCTCACCAAATTATTCATAGCACTTTCAGCGGTTGTTCCTGGCTTGAAAAGGATGGACAAGGCTTCTATAATCAAGAAGGCTATCGATTATGTGAAATGTCTTCAGAATCGAGTAAAAGATTTAGAAGAGCAAAGCAAGAAAAGAAAGACAGAATCTATGGTATGTTTCAAGGACGACAAATCTAATAGGGTTGTTGCCGTTGCTGACGACCCTGAAGCTATGAAGAGATTCCCCAATATTGAAGCAAGGGTCTCAGCAAAAGATGTACTCATCATAATAATGTGTGAGAAACAAAAGGACATTGCACTCAAACTACTGGCCAAGCTTCAAGCTCATAATCTCTCTGTGGTTTGTAGCAATGTTTTGCCATTTGGAAATTCTACTCTAAACATTATCACCATCGTTGCTCAGGTGGACCACGAAGAACTCAGCATGACAATGGACGACCTAGTGAAAAATGTGATCGAGGATTTGTTGGGGGTGTTGTAA 1437 0.3765 MASMDESWEILLSDLEMDDCPLFNEYHYMMNSFEEELMINGEISLQSELSLEGQSSNSNFTTQNIHVAAAGNNNTMNNSLLSEENTDFSLKQHASSESLEECTVVVPNNIPKETHEKHYDDEQSKENQEELQNRKSKRCRSSSQIQDHIIAERKRRENLTKLFIALSAVVPGLKREMDDCYLFNEYNYMNSFEEDLIINGEISLQSELSLEGQSSNSNFTTQNIHVAAADNNNTMNNSLSEENTDFSLKQHASSECLEESTVVVQNNIPKETHEKHYDDEQSKENQEELQNRKSKRCRNSSQIQDHIIAERKRRENLTKLFIALSAVVPGLKRMDKASIIKKAIDYVKCLQNRVKDLEEQSKKRKTESMVCFKDDKSNRVVAVADDPEAMKRFPNIEARVSAKDVLIIIMCEKQKDIALKLLAKLQAHNLSVVCSNVLPFGNSTLNIITIVAQVDHEELSMTMDDLVKNVIEDLLGVL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00150 478 Pfam Helix-loop-helix DNA-binding domain 305 351 IPR011598 GO:0046983
Sebi14g00150 478 Coils Coil 340 367 - -
Sebi14g00150 478 PANTHER BHLH TRANSCRIPTION FACTOR 20 178 - -
Sebi14g00150 478 MobiDBLite consensus disorder prediction 263 302 - -
Sebi14g00150 478 MobiDBLite consensus disorder prediction 269 302 - -
Sebi14g00150 478 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 180 IPR036638 GO:0046983
Sebi14g00150 478 Gene3D - 298 371 IPR036638 GO:0046983
Sebi14g00150 478 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 301 350 IPR011598 GO:0046983
Sebi14g00150 478 SMART finulus 307 356 IPR011598 GO:0046983
Sebi14g00150 478 SMART finulus 149 198 IPR011598 GO:0046983
Sebi14g00150 478 MobiDBLite consensus disorder prediction 114 143 - -
Sebi14g00150 478 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 304 366 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00150 Sebi-Chr14 2834397 2839265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00150 281 470 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.500 1.51e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi14g00150 HLH 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00150 - - gmx:100799087 249.595