Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00146 ATGGACAAGGCATCTATCGTTAACAACGCGATCAATTATGTGAAATATCTTCAGAAGAGTGTGAAAGATTTAGAGGAAGAGAACAAGAAAAGAAAGGTAGAATCGGTGGTATGCTTGAAAAACGACAAATCCTCCAATATTGAAGCTACGAAGAGATTTCCCATTGTTGAAGCAAGGGTCTTAGCAAAAGATGTATTCATTAGAGTTGTGTGTGAGCATCGAGAGGACATTGCAGTCAAGCTACTGGCCAAGCTTGAAGCGCATAATCTCTCTTTAGTTTGTAGCAATGTTTTGCCATTTGGGAATTCTACTCTAAACATTACCATCACTGCTCAGGTGGACCACGAATCCAGCACGACAAAGGACAACCTAGTGAAAAAATTGATCGAGGATTTGTTGGAGATCTTCTAA 411 0.399 MDKASIVNNAINYVKYLQKSVKDLEEENKKRKVESVVCLKNDKSSNIEATKRFPIVEARVLAKDVFIRVVCEHREDIAVKLLAKLEAHNLSLVCSNVLPFGNSTLNITITAQVDHESSTTKDNLVKKLIEDLLEIF 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00146 136 Coils Coil 7 34 - -
Sebi14g00146 136 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 34 IPR036638 GO:0046983
Sebi14g00146 136 Gene3D - 1 41 IPR036638 GO:0046983
Sebi14g00146 136 PANTHER BHLH TRANSCRIPTION FACTOR 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00146 Sebi-Chr14 2698357 2698836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00146 1 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 35.461 3.50e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00146 - - gmx:100815351 165.622