Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00142 ATGTCCTTCAATCAATCAAAGTCCGACAAGAACGACGCCGTTTACCGAAAATCCGGGCGATCCGCGAGCTTCAATCAGCAGAGAGGTTCCTCAGGCGCCTACGGCAAGGGTGGTGGCGGTGGCGGCGGTGGAGGACCCGCGCCGTCGAGCACCTCGGCTTCATCACTCTCCTCTAGCCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGGGTAAACCCTTCCCCAGTGAACTCGACAGAGTCTAATAGTGCTTCTGCTGCTCGGACCATACATAATGGTACCCATGTACAGCCACAATTACATGGAGCATCTGATGGGCCAGCTACAAAGTCATATGAATCATCTGCTGCACAGAGGAGCACTAGAGTTGTTCCAAAGGCTCCGGCTTCTGAACCGCCCCCCATGAATTCTGATACAGCCGCTCCTGCAAGCCCTGCTAAGGGAGATGCATCAAAGGCATTCCCTTTTCAATTTGGATCAATTATTCCTAGCTATATGAATGGAATGGCAATTCCTGCTCGTACAAGCTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGTTCGTCACGACTCATATAAATCTGCTGCATCTTCAGTGCCAATACCTCCTGTTCCAAAGCAGCAGCAACCACCTAGGAAAGATGCAGGTGTCACTGAGCAATCTAATGCTGGGGAGACCCATACAGGGACTAAGGCTAAAAAGGATCCTCAGGTGACAGCTTTGACCCCAGCAAACCAGATGCAGAAGCCTTCTGTTCTTCCTGTAACTGGGATTTCAATGGCAACACCATATCACCAGTCACATGCATCTTTACAGTTTGGTGGTCCTAATCCACAGATTCAATCTCAGGGTATGTCAACGACAGCCCTCCAGATGCCTATACCAATGTTACCTATTGGAAATGCTGCACAAGTGCAACAGCCGGTTTTTGTTCCAGGCCTTCAGCCTCATCCGATGCACCCTCAGGGGATCATACATCAAGGCCAAAATGTGGGTTTCACTCCTCAAATGGGTCATCAGTTGTCCCATCAATTAGGCAACATGGGTATTGGCATCAGCCCCCAATATCCCCAGCAGCAAGGGGGGAAATTTGCTGGTCCTCGAAAAACTACTCCTGTGAAGATAACTCATCCTGACACACATGAAGAGCTGAGACTTGATAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCCGTTAAATCTTTTGGGGCTTCACATCCTATGAGCTATTATCCATCCAGCTCATACAACACCACTCCTCTCTATTATCCACCTTCTAGCTCTCTTCCATTAACAAGTAGCCAGATAACTCCTAATTCTCAGCCACCATTATTCAATTATCCTGTGAACCGTGGTCCGCAAAATGTGGGTTTCATGAATTCATCATCGCATAGTTCCGTCCCTGTTAATAAAACTAGCCATCCTATTCCTGGCATGGTTGAACCACCTATTCCAGAATCTTCCCATGATGCACCTAATGCAGTGTCATCAGTTCCAACGAGGGTTGCTTCTGTGACTATTAAACCAAGTGGTGTGTCTGCTGTTGTGGACTCATCATTGGCCAATTCCAGTGTTTCTGGTGATCAAAATAGAGAACCTCCTAGTTCAGCAGCATCTTGTGACACTAGCTCCTCTGTGCCACAAAAAGGGTCTGAAACTTCTTTGGTGAAACAATCTGCTGCACCTGTTGTTGTAACTGCTGAGAAGCTTGCTGACACTTCCTTGGTGCTGCCTTCAGCAGCTGTGAGTGAGGATTCTGCCTCAGTTGTGGCTAATAATGAAGACAGAAGGAGGGAATCTCTTAGTAGGTCCAACTCTTTGAAGGATAACCAGAAGAAACTAGGGAAGAAAGGTCAATCATCACAATATCAGGTTTCTGTGCAATCTCCTACAGTGGCTAATATGCCTTCTCAAGCTGTTGACAGTGGTATATCTGATACTGGAGTTTCTGAACCTGTAGGAACTAAAACAAACCATTCTCCGGCAGTTACCACTGGAGATCTTCCTATATCTGACACACTATCTGGTAGCATTTCCAGTGCTGTTGAACTGGAGACAAGTGGGTCTGCAGAAGTATCTGCTTGTGTTTCGGCTGAAGGATATGGTGCTCAAGCTGCTGATAGTTTGGACCATCATAAGCATGATAAGATAGATGAATCATCTGAAGATCTGCACTCTACTGATCTTCCAGAAACAACTTCAAAGGATATCAATGATAGTTCAGAGAATGCTGGCAGTGACTCAATGTCTCTTTCAGTATCAAATACCAAGGATAGACCAATATTAGAACCAAATAAGGTGAAAACTACATCTAAAGGGAAAAAGAAAAGAAGAGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGTCCTGAAGAAAAGAAAGAAGCTGTCTTGATTTCAGAGAGCACAGAAAGTGCTTCGACTTCAGGAAGTTCAATGCAGTTGCCTGCAGATGCTGCTCAGTCAGATGCTATAGCAGGTGAGAAATGTGGACACAGTAAAGCTGAACCTGATGACTGGGAGGATGCTGCTGACATGTCTACTCCAAAACTGGAAGTTGATGATAAATCTCAACAGGTTAATGATGGAAGTGGAGGTACAGCCAAAAAGTATTCTCGCGATTTCCTTTTAAAATTTGCCGAGCAATGTACTGACCTTCCTGAAGGTTTTGTGATCACGGACATAGCTGAGATTTTGATGAGTGCTAACATTAGTAGTCCTCATGCTATGGAGCGTGATTCACATCCAAGTCCTGGAAGAATTGTAGATAGGCCAGGTGGGATGTCTCGGATGGAACGTCGTGGCAGTATCGTGGCTGATGAAGACAGATGGAATAGAGTTTCTAGTGCTTTTCATTCTGGACGAGGTTTGGATGGTATTGGGGGTAATGTGGGATTTCGAACTGGCCAAGGAGGCAATTTTGTTGTTTCAAGGAATCCTCGTGCACAGACACCTGTGCAATATGATCGGGGGATCCTTTCTGGGCCAATGCAATCTGTGGGAAATCAAGGTGGGATGCAACGAAACAGCCCTGATGGGGGGGAGAGGTGGCAGCGTGCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACTCCTCAGACTCCCATGCAGATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAGTGACAGATGTGGAAGAGGCAAAGCAGCGGCAGTTGAAAGGTATCTTGAACAAGTTAACTCCTCAGAATTTTGATAGACTCTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTGATGGAGCCTACCTTTTGTGAAATGTATGCCAACTTCTGTTCACATCTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAGAAGATAACCTTTAAAAGGTTATTATTAAATAAGTGTCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAAGCAAATAAGGTTGATGAGGGTGAGGTCAGGCAGTCTAAAGAAGAAAGGGAGGAGAGAAGAGTCAAGGCGAGAAGGCGCATGTTGGGAAACATCCGATTGATCGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATGAGGATCCTGATGAGGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATCGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCTTATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTCGGGTGAGGTTTATGTTGAAGGATGTCATTGACTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCCAAGAAGATTGAGGAGGTACACAGAGATGCTGCACAAGAGAGGCAGGCTCAAGCTGGTAGGCCGGGTCGTGGTCTGGGCAACAATCAGTCAACCAGAAGGAACCCTGTGGATTTTGGTCCAAGGGGATCATCTATGTTGTCTTCTCCTAATTCTCAGATGGGTGGACTGCGTGGGCTGCCTACTCATGTTCGTGGATATGGTTCTCAGGATGCTCGTTTTGAGGAAAGACAATCTTATGAGGCTAGGACCTTGTCAGTTACCTTGCCTCAAAGACCCTTAGGTGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCCATTAGAGGATCAACTGCAATTTCTAATTTGCCAGTATCTGATGTGCATCCTGGCTCTGGAGACTCTCATAGAATGACAACTGGTCTTAATGGTTATAGCAATTTATCAGAGCGTACACCATATAATTCAAGGGAGGATCTTGCATCAAGGTATATTACAGATAGGTTTTCAGGTCCAGCTGCTTATGATCAATCTAGTGCTCCTGATCGTAATATAAACTATGGTAACAGAGACTTGAGGAATGCTCCAGGTCTTGACAGACCTGTTGCAACTTCACCTCCTGCACAATTGCAAGGGTCAACAGTCTCCCAGAATGCTTCATCAGAGGTTTGGACAGAAGAACGACTGCGGGACATGTCCATGTCAGCAATCAAAGAATACTACAGTGCTAGAGATGAGAATGAAATTGCTTTATGCATCAAAGATTTGAACTCTCCAAGTTTTCATCCTTCCATGGTTTCTCTCTGGGTCACGGACTCATTTGAGAGAAAGGACATAGAAAGAGATCTTTTGGCCAAACTGCTTGTCAAGCTTGTGAAATCTCAGGATGGCACCTTGAGTCAAGCTCAACTCATCAAAGGGTTTGAAGCGGTTCTCAATACATTGGAGGATGCTGTTAATGATGCCCCCAGAGCACCAGAGTTTCTTGGCCGTATTTTTGCAAAAGCTATAACAGAGAATGTAGTCACTCTGAATGAGATTGGGCGGTTAATACATGATGGTGGGGAGGAGCCAGGCAGTCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTGGAGGTAATAAAAACTGAGAATGGGGACGTAGTTCTCAGTGAGATCCGTACAAGCTCTAACTTGCGGTTGGAGACTTTTCGGCCACCTAATCCTCTTACATCCAAGAAGTTAGAGAAATTTATTTAG 5220 0.4504 MSFNQSKSDKNDAVYRKSGRSASFNQQRGSSGAYGKGGGGGGGGGPAPSSTSASSLSSSRSFNKKSNNAQGGQSRVNPSPVNSTESNSASAARTIHNGTHVQPQLHGASDGPATKSYESSAAQRSTRVVPKAPASEPPPMNSDTAAPASPAKGDASKAFPFQFGSIIPSYMNGMAIPARTSSAPPNLDEQKRDQVRHDSYKSAASSVPIPPVPKQQQPPRKDAGVTEQSNAGETHTGTKAKKDPQVTALTPANQMQKPSVLPVTGISMATPYHQSHASLQFGGPNPQIQSQGMSTTALQMPIPMLPIGNAAQVQQPVFVPGLQPHPMHPQGIIHQGQNVGFTPQMGHQLSHQLGNMGIGISPQYPQQQGGKFAGPRKTTPVKITHPDTHEELRLDRADAYSDGGSSGARSHPNIPSQSQPVKSFGASHPMSYYPSSSYNTTPLYYPPSSSLPLTSSQITPNSQPPLFNYPVNRGPQNVGFMNSSSHSSVPVNKTSHPIPGMVEPPIPESSHDAPNAVSSVPTRVASVTIKPSGVSAVVDSSLANSSVSGDQNREPPSSAASCDTSSSVPQKGSETSLVKQSAAPVVVTAEKLADTSLVLPSAAVSEDSASVVANNEDRRRESLSRSNSLKDNQKKLGKKGQSSQYQVSVQSPTVANMPSQAVDSGISDTGVSEPVGTKTNHSPAVTTGDLPISDTLSGSISSAVELETSGSAEVSACVSAEGYGAQAADSLDHHKHDKIDESSEDLHSTDLPETTSKDINDSSENAGSDSMSLSVSNTKDRPILEPNKVKTTSKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKEAVLISESTESASTSGSSMQLPADAAQSDAIAGEKCGHSKAEPDDWEDAADMSTPKLEVDDKSQQVNDGSGGTAKKYSRDFLLKFAEQCTDLPEGFVITDIAEILMSANISSPHAMERDSHPSPGRIVDRPGGMSRMERRGSIVADEDRWNRVSSAFHSGRGLDGIGGNVGFRTGQGGNFVVSRNPRAQTPVQYDRGILSGPMQSVGNQGGMQRNSPDGGERWQRAASFQQRGLIPSPTPQTPMQMMHKAEKKYEVGKVTDVEEAKQRQLKGILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKVDEGEVRQSKEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRPGRGLGNNQSTRRNPVDFGPRGSSMLSSPNSQMGGLRGLPTHVRGYGSQDARFEERQSYEARTLSVTLPQRPLGDDSITLGPQGGLARGMSIRGSTAISNLPVSDVHPGSGDSHRMTTGLNGYSNLSERTPYNSREDLASRYITDRFSGPAAYDQSSAPDRNINYGNRDLRNAPGLDRPVATSPPAQLQGSTVSQNASSEVWTEERLRDMSMSAIKEYYSARDENEIALCIKDLNSPSFHPSMVSLWVTDSFERKDIERDLLAKLLVKLVKSQDGTLSQAQLIKGFEAVLNTLEDAVNDAPRAPEFLGRIFAKAITENVVTLNEIGRLIHDGGEEPGSLLEVGLAADVLGSTLEVIKTENGDVVLSEIRTSSNLRLETFRPPNPLTSKKLEKFI 1739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1023 1047 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 832 850 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 827 874 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 177 259 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 940 960 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 47 104 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1 157 - -
Sebi14g00142 1739 SMART ma3_7 1552 1666 IPR003891 -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1185 1209 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1444 1476 - -
Sebi14g00142 1739 FunFam Eukaryotic translation initiation factor 4G 1093 1328 - -
Sebi14g00142 1739 ProSiteProfiles MI domain profile. 1551 1675 IPR003891 -
Sebi14g00142 1739 SUPERFAMILY ARM repeat 1547 1734 IPR016024 -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 755 781 - -
Sebi14g00142 1739 Pfam MA3 domain 1554 1664 IPR003891 -
Sebi14g00142 1739 SUPERFAMILY ARM repeat 1089 1317 IPR016024 -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1319 1339 - -
Sebi14g00142 1739 Coils Coil 1175 1195 - -
Sebi14g00142 1739 SMART if4_15 1093 1315 IPR003890 GO:0003723|GO:0005515
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1529 1545 - -
Sebi14g00142 1739 Gene3D - 1093 1328 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 221 259 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 739 808 - -
Sebi14g00142 1739 Pfam MIF4G domain 1093 1315 IPR003890 GO:0003723|GO:0005515
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 739 754 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1347 1380 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 603 693 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1459 1476 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 638 693 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 18 32 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1494 1545 - -
Sebi14g00142 1739 FunFam Eukaryotic translation initiation factor 4G 1545 1738 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 1319 1380 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 544 581 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 366 427 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 612 637 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 406 427 - -
Sebi14g00142 1739 Gene3D - 1544 1739 - -
Sebi14g00142 1739 MobiDBLite consensus disorder prediction 382 398 - -
Sebi14g00142 1739 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 359 1739 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00142 Sebi-Chr14 2613533 2622439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00142 1 1738 Eukaryotic Initiation Factors Gene Family AT3G60240 48.042 0.0 1353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00142 K03260 - gmx:100798562 2396.7