Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00092 ATGGAGCGGGTTGCAGAGCCGAAGGTACTTCCTCGAACCTTGCCTATCCTAGTTGAGGTATCATCACATTCTGCTGCGGCAAGAGAGACAGGTCAGAGACTTAAGGGGCAGGGGGTTTCAAGTGCTGAGGGGATTTCAGCAAGAGAAATGAATCAATTGTCAAAAGCAAGGGAGAACATGGAAAGGAAAGGCCTCTTAGCAGAATCAGAAGAATTGATAACTGATGTTGAGACGTTGAAGGGCAGCAGTGATTCATTTGAGGATGGTGATCCAAGTTTATTCGCTGGTGCTAGTCATCCCCCAGAACCTATTGATACAGATCTTATGAGAACGGGTCCTTTCCTGGAAGATCTCTCAATTCGTGTTCCTGCCAAGAAACCAAGTCCTCGAGCATCACAGAACACAGAGAACTCTCCCCTTGCTCCAGATTCTGAGGAAAAGGAATGTGTTTGGGATGCATCTTTGCCTCCTAGTGGCAATGTCAGTCCACTTAGTAGTATTGATAGTGTTGGTGTTGTCACAGCAATGAGCATTGCTAATAGTTGTGCCAGTACATATCGGAGTGATGCAATCACTAGTGATGGCATGCTTAGTTTAGACAGGAATTGTGATAGTACTAAGGGGAGTGTAAGGGGGGATTCACTAGAGAGTGCAAAATCTAGTGCTAGTCGGGCAAGTGATAGCAGTGGCATTAGTGATGATAGCAACTGGAGCAACATTACTGGTGGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGATTACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAGCGACTTGGATGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGGAACTCGGTGTTATTTTGCAATGAAAGTTATGGATAAGGCATCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACAGAGAGGGAGATACTGCAATTGCTGGACCATCCATTTCTGCCAACTTTGTATACACATTTTGAGACTGACAGATTCTCCTGTTTAGTAATGGAATATTGTCCTGGGGGTGATCTACACACCTTAAGGCAGAGGCAACCAGGAAAACATTTCTCTGAATATGCTGCACGGTATGCTTTATATCTACACAGTTACATTCCTCTACCTAATCTCTTTTGTTAA 1179 0.4461 MERVAEPKVLPRTLPILVEVSSHSAAARETGQRLKGQGVSSAEGISAREMNQLSKARENMERKGLLAESEELITDVETLKGSSDSFEDGDPSLFAGASHPPEPIDTDLMRTGPFLEDLSIRVPAKKPSPRASQNTENSPLAPDSEEKECVWDASLPPSGNVSPLSSIDSVGVVTAMSIANSCASTYRSDAITSDGMLSLDRNCDSTKGSVRGDSLESAKSSASRASDSSGISDDSNWSNITGGANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARYALYLHSYIPLPNLFC 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00092 392 MobiDBLite consensus disorder prediction 24 47 - -
Sebi14g00092 392 MobiDBLite consensus disorder prediction 205 250 - -
Sebi14g00092 392 MobiDBLite consensus disorder prediction 205 245 - -
Sebi14g00092 392 FunFam Serine/threonine-protein kinase D6PK-like 271 356 - -
Sebi14g00092 392 SUPERFAMILY Protein kinase-like (PK-like) 254 379 IPR011009 -
Sebi14g00092 392 SMART serkin_6 273 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi14g00092 392 PANTHER FLIPPASE KINASE 1-RELATED 82 377 - -
Sebi14g00092 392 MobiDBLite consensus disorder prediction 122 164 - -
Sebi14g00092 392 Gene3D Phosphorylase Kinase; domain 1 267 379 - -
Sebi14g00092 392 Pfam Protein kinase domain 274 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi14g00092 392 ProSiteProfiles Protein kinase domain profile. 273 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00092 Sebi-Chr14 1656874 1658330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00092 1 377 AGC Kinase Gene Family AT2G44830 53.419 7.15e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi14g00092 Pkinase 1.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00092 - - gmx:100792314 577.015