Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00089 ATGGACACTCACGCTGGAAACACCAATGTGAATGCCGTTGATCACTTTGAAACCGTCGCAACGTCGTCGTTTCAGGACGCTCCAGCTCCAGCAGCGTTCTCTCGGAGTTCGAGCTTCCGGAGCATTTTCTTGGCAGAGAATTGGGCGGAGCTGCCATTGAAGGAGGACGACGCCGATGACATGGTCATCTATGGCGCCTTGCGCGAGGCTGCCACCATAGGGTGGTTCCCTGCTAACAACAATGGTGTGATCAACAGTGTTGACACAACGGTTAAAGTGGAAAATGAGGGTGAAAACAATAGCACTGTGGTGGCACGTGAGGTACACGCGCCGGCAAGAAAGGGGTTGGGGTACCGTGGTGTGCGGAGGAGGCCCTGGGGGAAGTATGCAGCTGAAATAAGGGACCCTAAGAGAAATGGCGCTAGGGTGTGGCTTGGGACATATGAAACGGCTGAAGATGCAGCTTTGGCTTACGATCGAGCCGCGTTTGAGATGCGCGGCTCGAAAGCCAAGCTAAATTTCCCTCACTTAATCGGCTCGGAATACACCCGGCCGATTAGACACACTCGCGGTACATCTTTGCCGAGATCACTCTAG 597 0.541 MDTHAGNTNVNAVDHFETVATSSFQDAPAPAAFSRSSSFRSIFLAENWAELPLKEDDADDMVIYGALREAATIGWFPANNNGVINSVDTTVKVENEGENNSTVVAREVHAPARKGLGYRGVRRRPWGKYAAEIRDPKRNGARVWLGTYETAEDAALAYDRAAFEMRGSKAKLNFPHLIGSEYTRPIRHTRGTSLPRSL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00089 198 Gene3D AP2/ERF domain 117 176 IPR036955 GO:0003700|GO:0006355
Sebi14g00089 198 CDD AP2 118 177 IPR001471 GO:0003700|GO:0006355
Sebi14g00089 198 Pfam AP2 domain 117 167 IPR001471 GO:0003700|GO:0006355
Sebi14g00089 198 SUPERFAMILY DNA-binding domain 117 176 IPR016177 GO:0003677
Sebi14g00089 198 ProSiteProfiles AP2/ERF domain profile. 117 175 IPR001471 GO:0003700|GO:0006355
Sebi14g00089 198 SMART rav1_2 117 181 IPR001471 GO:0003700|GO:0006355
Sebi14g00089 198 FunFam Ethylene-responsive transcription factor 2 116 176 - -
Sebi14g00089 198 PANTHER DNA-BINDING DOMAIN 96 180 IPR044808 GO:0003700|GO:0009873
Sebi14g00089 198 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Sebi14g00089 198 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00089 Sebi-Chr14 1582335 1582931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00089 33 187 AP2-EREBP Transcription Factor Family AT2G44840 58.065 5.67e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi14g00089 AP2 9e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00089 K09286 - gmx:100793366 258.07