Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00083 ATGGTAGAGGGGACAATGTCACTTGAAGCTGTTATAAAGGAAGCTGTTGATCTGGAGAACATTCCTCTTGAGGAGGTTTTTGATAATCTTAAATGCACAAGAGAAGGTTTAAGCTCTGAGCAAGTACAGGAGAGGCTAGACTTGTTTGGATACAATAAACTTGAAGAAAAAAAGGAAAGTAAAATACTAAAGTTTTTGGGCTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCTGCTGCTCTCATGGCCATTGCTATGGCACATGGAGGGGATGAACCTGGAGATTATCAGGATTTTGCTGGCATAATTATTTTGCTACTTATAAACTCTACCATCAGTTTCATAGAAGAAAATAATGCTGGTAATGCAGCTGCTGCCCTTATGGCAAGATTGGCCCCAAAAGCAAAGGTACTCCGTGATGGAAAATGGAGTGAAGAAGATGCTTCAGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTGGGTGACATCATTCCTGCTGATGCACGTCTCCTTGAAGGAGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTCACAAAAAGTCCTGGAGAAGGAGTATATTCTGGTTCAACTTGCAAGCAAGGAGAAATTGAGGCAGTTGTTATTGCAACTGGAGTTCACACTTTTTTTGGGAAGGCAGCTCATCTTGTGGAAAATACAACACATGTTGGCCATTTCCAGAAGGTTCTAACATCTATTGGGAATTTTTGCATCTGTTCAATTGCTGTTGGGATGATTATTGAAATCATTGTGATATATGGGATCTACAGAAGGGAATACCGAGTTGGTATTGATAACCTCCTTGTGCTACTAATTGGTGGGATCCCTATTGCAATGCCAACTGTCCTTTCTGTTACAATGGCTATTGGTTCACACCGGTTGTCTCAGCAGGGTGCCATAACTAAGAGAATGACTGCCATTGAAGAAATGGCTGGAATGGATGTGTTATGTAGTGACAAAACAGGAACATTAACTCTTAACAAGCTTACAGTGGACAAGAATATGATTGAGGTTTTTGCCAAAGGTGTTGACAAGGATATGGTTGTACTTATGGCTGCAAGAGCATCAAGGCTAGAGAACCAGGATGCAATTGATTGTGCAATTGTTTCAATGTTGGCAGACCCCAAGGAGGCACGAGCTGGAATAAAAGAAGTTCACTTCCTTCCATTCAATCCAACAGATAAAAGAACTGCACTTACATACATTGATGCTGCTGGTAAGATGCACAGGGTTAGCAAAGGTGCACCAGAACAGATTCTCAATCTTGCACATAACAAAGCAGAAATTAGACAGAAGGTTCATTCAATTATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTTGCAGTTGCTCGCCAGGAAGTACCTGAGGGAAATAAGGACAGTCAAGGAGGACCATGGGAGTTTGTTGGCCTTCTCCCTCTTTTTGACCCTCCTCGCCATGATAGTGCAGAAACAATCAGAAGAGCTCTTGATCTTGGTGTCAGTGTCAAAATGATCACTGGTGATCAACTTGCAATAGGTAAGGAAACAGGAAGGCGTCTAGGGATGGGAACTAACATGTATCCTTCTTCATCATTGCTTGGTGAAAATAAAGATGAATTGGGTGCTGTCTCCATTGATGATCTCATTGAGAGTGCTGATGGTTTTGCTGGTGTCTTCCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGGGTGAATGATGCACCTGCCCTAAAGATAGCTGACATAGGTATTGCAGTAGCAGATTCTACAGATGCTGCCAGAAGTGCTGCTGACATAGTGCTAACAGAACCTGGCTTGAGTGTGATCATAAGTGCAGTTTTAACTAGCCGTGCAATTTTCCAGAGAATGAAAAACTATACAATATATGCTGTGTCTATCACCATTCGTATTGTGCTGGGTTTCATGTTACTTAACTGCTTTTGGAAATTTGACTTTCCTCCCTTTATGGTTCTTGTCATTGCCATTCTCAATGATGGTACCATCATGACAATATCCAAAGACAGAGTTAAGCCTTCTCCAGTTCCTGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGGATTATTCTTGGTAGCTACCTGGCTCTAATGACAGTGCTCTTCTTCTGGAACCATTTTGGTGTAAGACATTTCCGCGCCACTACAAATGATCCTGTTACTGATGAAATGAAACAAATGTTGGCATCTGCTGTCTATCTTCAAGTCAGTACAATTAGCCAAGCCTTAATCTTTGTGACACGCTCTAGGGGTTGGTCCTACACAGAAAGACCTGGTGTTTTGCTTGTTATTGCCTTTGTTATTGCTCAGCTGGTTGCAACTGTTATATCTGCCACTGCCACTTGGAAAATTGCTGGAATCAGAAGCATAGGTTGGGGCTGGACAGGAGTCATTTGGTTGTTCAATACTATAACTTATGTTTTTCTGGATCCTTTAAAGTTTGCTGTTCGTTATGCACTAAGTGGAAGGGCATGGAATCTGGTGGTAGACCAAAGAACTGCATTCACAAACAAAAATGACTTTGGAAGAGAAGCTCGTGAGGCTGCATGGGCTGCTGAACAGAGAACCTTGCATGGCCTTCGCTCTGTTGAGTCAAAAACATACACAGAGAAACACACCTTTAGAGAAATAAACACATTGGCAGAAGAGGCTAGGAGGCGAGCAGAGATAGCAAGGTTGAGAGAGCTTCACACTCTTAAAGGTAGAGTGGAATCGTTTGCCAAGCTAAGGGGTTTGGACATTGATGCCATGAACGGGCACTATACTGTCTAA 2856 0.423 MVEGTMSLEAVIKEAVDLENIPLEEVFDNLKCTREGLSSEQVQERLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAALMAIAMAHGGDEPGDYQDFAGIIILLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKSPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVLTSIGNFCICSIAVGMIIEIIVIYGIYRREYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNMIEVFAKGVDKDMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYIDAAGKMHRVSKGAPEQILNLAHNKAEIRQKVHSIIDKFAERGLRSLAVARQEVPEGNKDSQGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDELGAVSIDDLIESADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADSTDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLNCFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPVPDSWKLSEIFATGIILGSYLALMTVLFFWNHFGVRHFRATTNDPVTDEMKQMLASAVYLQVSTISQALIFVTRSRGWSYTERPGVLLVIAFVIAQLVATVISATATWKIAGIRSIGWGWTGVIWLFNTITYVFLDPLKFAVRYALSGRAWNLVVDQRTAFTNKNDFGREAREAAWAAEQRTLHGLRSVESKTYTEKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYTV 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00083 951 Gene3D - 328 626 IPR023214 -
Sebi14g00083 951 SFLD p-type atpase 313 640 IPR044492 -
Sebi14g00083 951 Gene3D - 96 816 - -
Sebi14g00083 951 CDD P-type_ATPase_H 36 842 IPR006534 GO:0008553|GO:0016020|GO:0120029
Sebi14g00083 951 SUPERFAMILY HAD-like 327 636 IPR036412 -
Sebi14g00083 951 Gene3D - 343 490 IPR023299 GO:0000166
Sebi14g00083 951 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 848 IPR023298 -
Sebi14g00083 951 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Sebi14g00083 951 PRINTS P-type cation-transporting ATPase superfamily signature 589 608 - -
Sebi14g00083 951 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Sebi14g00083 951 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Sebi14g00083 951 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Sebi14g00083 951 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Sebi14g00083 951 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Sebi14g00083 951 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Sebi14g00083 951 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Sebi14g00083 951 FunFam Plasma membrane ATPase 343 490 - -
Sebi14g00083 951 Gene3D - 134 218 - -
Sebi14g00083 951 PRINTS H+-transporting ATPase (proton pump) signature 561 577 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi14g00083 951 PRINTS H+-transporting ATPase (proton pump) signature 620 645 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi14g00083 951 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi14g00083 951 PRINTS H+-transporting ATPase (proton pump) signature 589 605 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi14g00083 951 PRINTS H+-transporting ATPase (proton pump) signature 761 782 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi14g00083 951 PANTHER CALCIUM-TRANSPORTING ATPASE 19 884 - -
Sebi14g00083 951 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Sebi14g00083 951 Gene3D - 900 951 - -
Sebi14g00083 951 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 806 IPR006534 GO:0008553|GO:0016020|GO:0120029
Sebi14g00083 951 Pfam E1-E2 ATPase 132 310 - -
Sebi14g00083 951 FunFam Plasma membrane ATPase 483 637 - -
Sebi14g00083 951 SFLD Haloacid Dehalogenase 313 640 - -
Sebi14g00083 951 NCBIfam HAD-IC family P-type ATPase 564 668 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi14g00083 951 NCBIfam HAD-IC family P-type ATPase 103 538 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi14g00083 951 FunFam Plasma membrane ATPase 134 218 - -
Sebi14g00083 951 Pfam haloacid dehalogenase-like hydrolase 327 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00083 Sebi-Chr14 1482551 1489883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00083 8 951 Primary Pumps ATPases AT5G62670 80.084 0.0 1535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00083 K01535 - gmx:100794938 1635.16