Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00065 ATGAATGAACCCAGTAAAAGGCAAAGGAAACCCTGCACTGCCTACAGTCACATAATGAGAATGATGTTGTTCACCCGCCATCTCTGTAGCAGCAGCTGCGCCTCAAAGATTTCAAAAATCCCTTCAAGGTACAAGAAGGTTGCCGTTTCACAAGCTCAACAAGCCCTCACTGACTACCTCCACGCCACGAGGTGCCTCCCTTATGCCTTCGCTGATCAGATTGCCAAGAACTCCTTTCTCTCCCTTTCCAATCTCATTGCCAAGTTGGGATCTTTTTCCCCTTCAACTTTCTCCAAGACCTTTGACAAGTTCCTCAGGTACAACCCCATCAATGAGTTTGAGTTTTTCTTTGAAAGCATTGGCATTCACCACACCCACCTCCCTGCCTTGTTGCCCCACAACAAGTTCTTCTTTTCTGAAGATGGGTCACTTCTGGATGCTGCTTGTGCACTCTCTGAATTTGGGTTTCCCTGGGATAGGCTTGGTTTGCTGTATATGGAGAGTAGTTCTGTGTTCAGTATGAGTGCTTCTGACTTGAAGGGCAGGCTTTGTTGGTTCAAAAGATATGGTTTTTCCAATGTCCAAGTCGTTGGGATATGTTTTGCTTTCCCTTTTGTTTTTGGTGGGGAGGAAGGCCAGTTGGGTTCTGAGATTGATGGGTTATTGACTAGTCTGAAGTTGGTTTTTTTGGACTTTGATTTGGCAGGGTCTGTTGAGGGCAATGTGGAGGCTTGGCATGAGGTGTGTAGGAAAATCAAGGTGTTTTATGATTTGAATGGTGACAAGGGCTTTGGGGAAAATGCTGTGACTATGAAAATCTTAAGTCACTTGCATGGAAGCAGTAGTGAGTTACAACAAAGATTTGATTGCCTTCTACATTCAGGAATTGAATTCTCAAAGCTCTCTAAGTTGGTTAGAATTCGACCAAAGATTCTAAGCCAAAGCCATGAAATTATAGAGAAAAAGATTAATTTCCTCTGTAAGGAAATGGGAAGCTCCATAGAGCTTTTGGATACTTTTCCAGCATTCCTATGTTTTGACTTAGAGAACCGCATCAAGCCTAGGTACAGATTCCATATGTGGGCTATAGAAAAGGGTCTGTGTACCAAAAATTATTCCATTGCAAGCATGATTGCAACCAGTGACAAGAATTTTGTTGCTCGCACTTTTAAAATTCACCCTGCTGCTCCAAAACATTGGTTTGAGCAATTCTATCTCAGGAAATTGCTAGTATGA 1236 0.4288 MNEPSKRQRKPCTAYSHIMRMMLFTRHLCSSSCASKISKIPSRYKKVAVSQAQQALTDYLHATRCLPYAFADQIAKNSFLSLSNLIAKLGSFSPSTFSKTFDKFLRYNPINEFEFFFESIGIHHTHLPALLPHNKFFFSEDGSLLDAACALSEFGFPWDRLGLLYMESSSVFSMSASDLKGRLCWFKRYGFSNVQVVGICFAFPFVFGGEEGQLGSEIDGLLTSLKLVFLDFDLAGSVEGNVEAWHEVCRKIKVFYDLNGDKGFGENAVTMKILSHLHGSSSELQQRFDCLLHSGIEFSKLSKLVRIRPKILSQSHEIIEKKINFLCKEMGSSIELLDTFPAFLCFDLENRIKPRYRFHMWAIEKGLCTKNYSIASMIATSDKNFVARTFKIHPAAPKHWFEQFYLRKLLV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00065 411 PANTHER CGI-12 PROTEIN-RELATED 54 392 IPR003690 GO:0003690|GO:0006355
Sebi14g00065 411 Pfam mTERF 277 385 IPR003690 GO:0003690|GO:0006355
Sebi14g00065 411 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Sebi14g00065 411 SMART mt_12 334 368 IPR003690 GO:0003690|GO:0006355
Sebi14g00065 411 SMART mt_12 162 192 IPR003690 GO:0003690|GO:0006355
Sebi14g00065 411 Gene3D Transcription termination factor 3, mitochondrial 91 404 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00065 Sebi-Chr14 1177790 1179507 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi14g00065 mTERF 6.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00065 - - var:108346236 299.671