Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00045 ATGGATGAGAGGATGCTGGATGCAATATGTGAAAGGCTAAAGCCTGCATTATGCACTGAAGGGACCTATCTTGTTCGTGAGGGTGATCCTGTGAATAAGATGCTCTTCATAATTAGAGACCATCTTGATTCTTACACCACAAATGGAGGCCGTGCTGGATTCTTCAACTCATGCCGTATTGGGCCAGTTAAAGCCATATCAGAAGTAGAGGCCTTTGCACTCATAGCTGAAGACTTAAAATTTGTTGCATCTCAATTTAGAAGACTACACAGTAAACAACTGAGGCATAAATTCAGGTTTTACTCACACCAATGGAGAACATGGGCTGCTTGTTTCATTCAAGCTACATGGAGACGACACAAGAAAAGGAAAGAAGATGCTGAATTAAGGGCCAGGGAGAATCTAACAGCTTCTGAGCCTGAAACACCAACATCTGGTTCAGGCTTTGGGTGGGAAGCCAACATGGAAAGACAAAGGGGAGTTACAGTAGCACCAGTGACACCAGCTATGACAAGATGA 519 0.4374 MDERMLDAICERLKPALCTEGTYLVREGDPVNKMLFIIRDHLDSYTTNGGRAGFFNSCRIGPVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQATWRRHKKRKEDAELRARENLTASEPETPTSGSGFGWEANMERQRGVTVAPVTPAMTR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00045 172 Gene3D Jelly Rolls 1 88 IPR014710 -
Sebi14g00045 172 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Sebi14g00045 172 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 63 138 - -
Sebi14g00045 172 SUPERFAMILY cAMP-binding domain-like 1 88 IPR018490 -
Sebi14g00045 172 MobiDBLite consensus disorder prediction 137 151 - -
Sebi14g00045 172 MobiDBLite consensus disorder prediction 130 152 - -
Sebi14g00045 172 CDD CAP_ED 1 101 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00045 Sebi-Chr14 912186 913184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00045 1 135 Ion Channels AT2G28260 72.840 9.33e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00045 K05391 - qsa:O6P43_000340 262.692