Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00026 ATGTTGGACTACGAATGGGGAAACCCATCCACGATAATGCTCACCGGAAATGAAGACGGCTCTGCAGCTGCCTCCGATCAAACCCACCGTCAAATCTTCGACCACTACAACTCTCACACCTTGCTACCCGACCACTTCCTACATGGGCCTGGGCCCACACACAACAACACCACTACAACCACAGCCTCAAACACCGTGGATTTCACTCAGCACCACCACTTCAACCCACAAGCCCACCACCACCTCCACCACACTTTCTTCGACCCACGCGCCTTCCATGGCGCGTCCTCAACCTCCTACCCTCCGCCCCAACCACCACCTCCTTCCATGCTCTCCCTCGACCCCTTGAACGGGCCCGGCACAGGGCCCGGGCTCCTCCTCGTGCCTAAGTCCGAGGACGTCGGTCGGCCCATGGACTTCGTGGGCTCGAGAATTGGCCTCAACCTGGGAGGCCGCACGTACTTCTCATCCTCTGAAGACGACTTCGTGAGCCGGCTCTACCGCCGGTCCAGGCCCGCTGAACCGGGCTCGACCGCTTCCTCGAACTCGCCCAGGTGCCAGGCCGAAGGATGCAATGCTGATCTGTCACAGGCAAAGCACTACCACCGACGCCACAAGGTGTGCGAGTTTCACTCCAAGGCCGCCACCGTCATCGCCGCCGGGTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTCCATCTTCTTTCTGAGTTTGATAATGGAAAACGTAGCTGCAGGAAGAGACTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAGCAACCAACTCAAGAAATTCAGAAAACTCAGACTAGTTTGGATAATGTTGCAAGATCCCCACCGGACTCTGGAACTCAGTCGTCATCGTCGGTGACGGTGGCAGTGTCGCCGCCGGATTATTTCCGGCAAAGGCCTTACCAAAGCCCAAGCCCATCAACAACATCAAGCTCACTGTTTTTCTCAAGCGGCTAG 975 0.5682 MLDYEWGNPSTIMLTGNEDGSAAASDQTHRQIFDHYNSHTLLPDHFLHGPGPTHNNTTTTTASNTVDFTQHHHFNPQAHHHLHHTFFDPRAFHGASSTSYPPPQPPPPSMLSLDPLNGPGTGPGLLLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAEPGSTASSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPTQEIQKTQTSLDNVARSPPDSGTQSSSSVTVAVSPPDYFRQRPYQSPSPSTTSSSLFFSSG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00026 324 FunFam Squamosa promoter-binding-like protein 14 177 247 - -
Sebi14g00026 324 SUPERFAMILY SBT domain 184 264 IPR036893 GO:0003677|GO:0005634
Sebi14g00026 324 ProSiteProfiles Zinc finger SBP-type profile. 183 260 IPR004333 GO:0003677
Sebi14g00026 324 MobiDBLite consensus disorder prediction 249 324 - -
Sebi14g00026 324 Pfam SBP domain 186 259 IPR004333 GO:0003677
Sebi14g00026 324 MobiDBLite consensus disorder prediction 93 112 - -
Sebi14g00026 324 MobiDBLite consensus disorder prediction 304 324 - -
Sebi14g00026 324 MobiDBLite consensus disorder prediction 264 297 - -
Sebi14g00026 324 Gene3D - 176 247 IPR036893 GO:0003677|GO:0005634
Sebi14g00026 324 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 93 316 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00026 Sebi-Chr14 500623 502466 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00026 1 233 SBP-box Gene Family AT1G02065 45.635 3.91e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sebi14g00026 SBP 4.6e-31 No_clan