Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi14g00024 ATGTTCTGTGATCTTAACAACCATATCATCAGAGAGGAAAATAACGGAAACAGTAACAGTTCTATTTGTTACTACTATTCATCATCATGGCAACCCTTACCCACTTCTTCTACCTGCACCCTCCTTAACAACACCACCACCACTGCGGCAGAGACTTCTCACAACCACCACCAGCTACTACCTCTGTATGTGCAGGGTGATTGTTCCCACGTGCAGCCTGACCCACATCTCACGTGTTTGTATCTTGGTAAGAGGCATTACTTAGAGGACACTACTACTGATCATACTCCTCATCCGGGGGAGCGACACGTGTGCGGTGGTGATGGCCTTGGCTTAAAGGCTAATAAGAGAGCCAGACCCTTCTATGGCAGCGGTGGGGCTGCAGCTGCCGGCGGAGAGAAGGCGGCGGCGATGGTTCCTAGATGTCAGGTGGAGGGGTGCCACGTGGCACTGTTGAACGCGAAGGAATACCACAGGAGGCACAAAGTTTGTGATATGCATTCCAAGGCAGCCAAAGTTGTGGTGTTAGGGTTGGAGCAGAGATTCTGTCAGCAGTGTAGCAGGTTTCATGTGGTGTCAGAGTTTGACGATTCAAAGAGGAGTTGTAGGAGGAGACTAGCGGGCCATAATCAGCGAAGGAGAAAAACCTCTCATTCTCATTCTCTTACTGCAGGGAATTCTAGTCAAGGGTGTGCTCTCTCTCTTCTGTCATGTGGGAGTGATTCTTGGCTTTGTGATGATGCTGATTTTTCCATAAGATGCAGTGCAGCATTACGCGAATTGATAGCAGAAAACCGTGTTTCAGCCTCTTCCTTCATGACTAGACATTTGCCCCACCAACACCAAGCAGTGGAGGAAGAGGTACGGCATCAACATGATCATAATCAGGACTTCAATTATTTTCCCCAGACACAATAA 918 0.4847 MFCDLNNHIIREENNGNSNSSICYYYSSSWQPLPTSSTCTLLNNTTTTAAETSHNHHQLLPLYVQGDCSHVQPDPHLTCLYLGKRHYLEDTTTDHTPHPGERHVCGGDGLGLKANKRARPFYGSGGAAAAGGEKAAAMVPRCQVEGCHVALLNAKEYHRRHKVCDMHSKAAKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNQRRRKTSHSHSLTAGNSSQGCALSLLSCGSDSWLCDDADFSIRCSAALRELIAENRVSASSFMTRHLPHQHQAVEEEVRHQHDHNQDFNYFPQTQ 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi14g00024 305 Gene3D - 133 203 IPR036893 GO:0003677|GO:0005634
Sebi14g00024 305 MobiDBLite consensus disorder prediction 206 225 - -
Sebi14g00024 305 MobiDBLite consensus disorder prediction 279 296 - -
Sebi14g00024 305 Pfam SBP domain 142 215 IPR004333 GO:0003677
Sebi14g00024 305 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 68 253 IPR044817 GO:0003677
Sebi14g00024 305 SUPERFAMILY SBT domain 140 220 IPR036893 GO:0003677|GO:0005634
Sebi14g00024 305 ProSiteProfiles Zinc finger SBP-type profile. 139 216 IPR004333 GO:0003677
Sebi14g00024 305 FunFam Squamosa promoter-binding-like protein 14 133 203 - -
Sebi14g00024 305 MobiDBLite consensus disorder prediction 278 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi14g00024 Sebi-Chr14 406931 410887 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi14g00024 139 215 SBP-box Gene Family AT2G42200 71.429 1.01e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sebi14g00024 SBP 1.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi14g00024 - - gmx:100780159 290.812